| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2505861 | 72 (0.880) | 4 (0.060) | 4/86 | NT | 5.8% | coding (33/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA |
| ? | W3110S.gb | = 2505867 | 66 (0.920) | coding (39/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA | |||||
Only 100 of 123 total aligned reads displayed.
CACAGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTGACGACG > W3110S.gb/2505792‑2505931 | cacaGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTgg > 1:4016420/1‑71 (MQ=255) acaGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGATAGTCATCATTGTTGAAGACGAATTCCTgg > 1:4004134/1‑70 (MQ=255) acaGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTgg < 1:4358764/70‑1 (MQ=255) acaGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTgg < 1:2697530/70‑1 (MQ=255) acaGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTgg < 1:6137091/70‑1 (MQ=255) aGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGca > 1:5744875/1‑70 (MQ=255) gCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGcac < 1:4503117/69‑1 (MQ=255) cTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCacaa > 1:4414801/1‑70 (MQ=255) tACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGc < 1:237914/65‑1 (MQ=255) cGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAGTTCCTGttgtgcca < 1:6450834‑M1/69‑9 (MQ=255) gTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagga > 1:6883039‑M2/1‑66 (MQ=255) gTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagg < 1:6436820‑M2/70‑5 (MQ=255) tATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAAc > 1:321862/1‑71 (MQ=255) tATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAAc > 1:5916431/1‑71 (MQ=255) aTTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAAc > 1:3900665/1‑70 (MQ=255) tGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAAc > 1:3785424/1‑68 (MQ=255) gCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGttgtgccaggaatt > 1:4364438‑M1/1‑54 (MQ=255) gCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGa < 1:2697223/70‑1 (MQ=255) gCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAg > 1:4722454/1‑71 (MQ=255) gCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAg > 1:3415093/1‑71 (MQ=255) gCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAg > 1:1555360/1‑71 (MQ=255) cTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAca > 1:3699239‑M2/1‑59 (MQ=255) cTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAca > 1:2217746‑M2/1‑59 (MQ=255) tttGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagg > 1:2675993‑M2/1‑58 (MQ=255) tttGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagg > 1:5963574‑M2/1‑58 (MQ=255) tttGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagg > 1:550339‑M2/1‑58 (MQ=255) tttGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCt > 1:6820388/1‑71 (MQ=255) tGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTgg > 1:6440073/1‑71 (MQ=255) gAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGc > 1:3006821/1‑71 (MQ=255) aGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAcagg < 1:7652169‑M2/58‑5 (MQ=255) ggAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAAca < 1:4652807‑M2/52‑3 (MQ=255) gAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:36752/71‑1 (MQ=255) aGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGca > 1:6185977/1‑45 (MQ=255) tGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAag < 1:6864525/71‑1 (MQ=255) tatTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAagag > 1:6738072/1‑70 (MQ=255) tatTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGc < 1:4883556/71‑1 (MQ=255) ttGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCacaa > 1:688809/1‑41 (MQ=255) ttGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:7898620/1‑70 (MQ=255) tgtgAAAGTCTTCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:2448122/1‑69 (MQ=255) tgtgAAAGTCATCATTGTTGAAGACTAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca < 1:1302224/69‑1 (MQ=255) tgtgAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:620368/1‑69 (MQ=255) gAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGc > 1:3326398/1‑70 (MQ=255) aaaGTCATCATTGTTGAAGACGAATTCCTGttgtgccagg < 1:253177‑M1/40‑11 (MQ=255) aaaGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGcc < 1:3214902/70‑1 (MQ=255) aaaGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGcc < 1:2945275/70‑1 (MQ=255) aaaGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCa < 1:7467865/71‑1 (MQ=255) gTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGAt < 1:5245055/71‑1 (MQ=255) atcatTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATgg < 1:43401/70‑1 (MQ=255) tcatTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:3307845/51‑1 (MQ=255) tcatTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:7123946/51‑1 (MQ=255) tcatTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:2964706/51‑1 (MQ=255) tcatTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:7314494/51‑1 (MQ=255) catTGTTGAAGACGAATTCCTGttgtgccaggaat < 1:1106690‑M1/35‑14 (MQ=255) catTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTaaa > 1:6799318/1‑52 (MQ=255) catTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATg > 1:6607827/1‑67 (MQ=255) atTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGAt > 1:2231083/1‑71 (MQ=255) tgttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTg > 1:6604364/1‑71 (MQ=255) gttgAAGACGAATTCCTGGCACAACAGGAACTGAGCt > 1:6609063/1‑37 (MQ=255) gttgAAGACGAATTCCTGGCACAACAGGAACTGAGCt > 1:7896295/1‑37 (MQ=255) gttgAACACGAATTCCTGGCACAACAGGAACTGAGCt > 1:4320839/1‑37 (MQ=255) ttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:1861934/45‑1 (MQ=255) ttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTa < 1:2694382/45‑1 (MQ=255) ttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGc < 1:3082330/56‑1 (MQ=255) ttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGt < 1:1307887/70‑1 (MQ=255) ttgAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTc < 1:340911/71‑1 (MQ=255) gAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGAtt < 1:394557/66‑1 (MQ=255) cGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCATATGGAGATTGTCGGCACCt < 1:2443459/71‑1 (MQ=255) gAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGa > 1:5348761/1‑52 (MQ=255) gAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGgag < 1:3605517/57‑1 (MQ=255) gAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGga < 1:6652902/56‑1 (MQ=255) gAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCtt < 1:4577436/71‑1 (MQ=255) gAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCt < 1:2964780/70‑1 (MQ=255) aaTTCCTGGCACAAcaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaagc > 1:4364438‑M2/1‑14 (MQ=255) aaTTCCTGGCACAACAGGAACTGAGCTGGCTAAtt < 1:5881723/35‑1 (MQ=255) aaTTCCTGGCACAACAGGAACTGAGCTGGCTAAtt < 1:3584181/35‑1 (MQ=255) aaTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca < 1:183489/43‑1 (MQ=255) aaTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCGGATGGAGATTGTCGGCACCttt < 1:4657392/71‑1 (MQ=255) aaTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTc < 1:5469145/62‑1 (MQ=255) aTTCCTGGCACAAcaggaattcgtcttcaacaatg < 1:1106690‑M2/35‑23 (MQ=255) aTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:3171194/1‑42 (MQ=255) aTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:2620499/1‑42 (MQ=255) aTTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGca > 1:7164432/1‑42 (MQ=255) ttCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGc < 1:625331/63‑1 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaagcaataac < 1:6436820‑M1/70‑67 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaagcaataac < 1:7760858‑M1/70‑67 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaa > 1:5963574‑M1/1‑4 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaa > 1:550339‑M1/1‑4 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaa > 1:3984228‑M1/1‑4 (MQ=255) ccTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggct < 1:7652169‑M1/58‑55 (MQ=255) ccTGGCACAAcaggaattcgtcttcaacaatgatgacttt < 1:253177‑M2/40‑31 (MQ=255) cTGttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaagcaataacg < 1:3057003‑M1/70‑68 (MQ=255) cTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCa < 1:821609/44‑1 (MQ=255) cTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCa < 1:833811/44‑1 (MQ=255) cTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCttt < 1:4836435/66‑1 (MQ=255) cTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTgacga < 1:1776107/71‑1 (MQ=255) tgttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaag > 1:3699239‑M1/1‑2 (MQ=255) tgttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactccggctcaaag > 1:2217746‑M1/1‑2 (MQ=255) tgttgtgccaggaattcgtcttcaacaatgatgactttcacaatatcactcc < 1:4652807‑M1/52‑51 (MQ=255) tGGCACAAcaggaactcgtcttcaacaatgatgactttcacaatatcactccggctcaaagcaataacg < 1:6450834‑M2/69‑62 (MQ=255) ggCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTGacgacg > 1:1725137/1‑71 (MQ=255) | CACAGGCTACGTTATTGCTTTGAGCCGGAGTGATATTGTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTGACGACG > W3110S.gb/2505792‑2505931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |