| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2763935 = | 79 (0.970) | 5 (0.070) | 3/88 | NT | 6.5% | intergenic (‑126/+234) | yfjL/yfjM | hypothetical protein/hypothetical protein |
| ? | W3110S.gb | 2763964 = | 73 (1.000) | intergenic (‑155/+205) | yfjL/yfjM | hypothetical protein/hypothetical protein | |||||
Only 100 of 116 total aligned reads displayed.
TCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTA > W3110S.gb/2763865‑2764004 | tCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCtttt < 1:2274031/71‑1 (MQ=255)tCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCtttt < 1:3875643/71‑1 (MQ=255) aaaccttgattaaggctgtgcctaccttacgttagttggggcagtatgttatataaccaaattagacgt < 1:6913787‑M1/1‑1 (MQ=255) aaccttgattaaggctgtgcctaccttacgttagttggggcagtatgttatataaccaaattagacgTCAg < 1:4340248‑M1/4‑1 (MQ=255) tCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCa > 1:869319/1‑68 (MQ=255) tCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCa > 1:6778795/1‑68 (MQ=255) tCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGa > 1:118299/1‑71 (MQ=255) cACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGGTTTTCAGGAt > 1:3308843/1‑71 (MQ=255) cACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGAt > 1:2326014/1‑71 (MQ=255) cACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGACGCAGGTATCAAGCTTTTCAGGAt > 1:1168098/1‑71 (MQ=255) gCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCca > 1:1040809/1‑71 (MQ=255) atcaCCAGTGATCTAAATACATCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaaa > 1:5358147/1‑70 (MQ=255) tcaCCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAata < 1:2297358/71‑1 (MQ=255) tcaCCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAata < 1:6962310/71‑1 (MQ=255) cAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGAtt < 1:6987141/58‑1 (MQ=255) gTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTaa < 1:6822888/71‑1 (MQ=255) gTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTaa > 1:943686/1‑71 (MQ=255) tGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCtttt < 1:4226572/48‑1 (MQ=255) tGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAc > 1:3940627/1‑71 (MQ=255) taccttacgttagttggggcagtatgttatataaccaaattagacgTCAg < 1:3825352‑M1/4‑1 (MQ=255) aTCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCa < 1:5233625/48‑1 (MQ=255) aTCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAccc > 1:510105/1‑71 (MQ=255) tCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGa > 1:763291/1‑50 (MQ=255) tCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGa > 1:7073070/1‑50 (MQ=255) cttacgttagttggggcagtatgttatataaccaaattagacgTc > 1:6184911‑M1/44‑45 (MQ=255) cTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATAtt > 1:5440722/1‑62 (MQ=255) cTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAccc > 1:6109923/1‑69 (MQ=255) aaaTACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGAc > 1:3724127/1‑71 (MQ=255) aaTACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTg < 1:2008470/68‑1 (MQ=255) aaTACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTg < 1:382185/68‑1 (MQ=255) aaTACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTg < 1:4520594/68‑1 (MQ=255) aaTACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACg > 1:4033279/1‑71 (MQ=255) gttagttggggcagtatgttatataaccaaattagacgTCAGGATTCCACAAATATTGTAACCCt > 1:3113781‑M1/39‑65 (MQ=255) aCTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTc < 1:4743134/46‑1 (MQ=255) cTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCt > 1:7039144/1‑63 (MQ=255) cTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTa < 1:940166/71‑1 (MQ=255) ttCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAg < 1:7806369/39‑1 (MQ=255) ttCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCca > 1:3981405/1‑46 (MQ=255) ttggggcagtatgttatataaccaaattagacgTCAg > 1:2583202‑M1/34‑37 (MQ=255) cacaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAtt > 1:3161777/1‑71 (MQ=255) cacaGCCATTCTAGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAtt > 1:6405759/1‑71 (MQ=255) acaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAttt < 1:1632042/71‑1 (MQ=255) acaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAttt > 1:1282520/1‑71 (MQ=255) acaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAtt < 1:1895122/70‑1 (MQ=255) acaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAtt < 1:2927773/70‑1 (MQ=255) acaGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAtt < 1:2918461/70‑1 (MQ=255) aGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg < 1:6668827/71‑1 (MQ=255) aTTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTtat < 1:730961/71‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGt < 1:2486651/46‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGt < 1:4709837/57‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTaa < 1:48097/61‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTaa < 1:2072865/61‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTtata < 1:1476945/71‑1 (MQ=255) ttCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTtata < 1:2082297/71‑1 (MQ=255) ctcGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaa > 1:3286719/1‑37 (MQ=255) ctcGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaa > 1:5119477/1‑37 (MQ=255) ctcGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTg > 1:5363209/1‑43 (MQ=255) gttatataaccaaattagacgTCAGGATTCCACAAATATTGTAAccc > 1:4453876‑M1/22‑47 (MQ=255) cGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAcc > 1:4469878/1‑46 (MQ=255) cGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATaa > 1:3706217/1‑70 (MQ=255) ggTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATaa < 1:3341236/69‑1 (MQ=255) tCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAttt < 1:2904507/57‑1 (MQ=255) tCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATa < 1:1258239/71‑1 (MQ=255) cGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATAc > 1:2952184/1‑71 (MQ=255) cGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATAc > 1:7254439/1‑71 (MQ=255) gCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATAc < 1:7332833/70‑1 (MQ=255) gCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACt > 1:1739431/1‑71 (MQ=255) cAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAcc < 1:1583281/40‑1 (MQ=255) cAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTg < 1:5548194/71‑1 (MQ=255) cAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTg < 1:7344649/71‑1 (MQ=255) aGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTtatat < 1:4055903/61‑1 (MQ=255) aGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGc > 1:3810142/1‑71 (MQ=255) accaaattagacgTCAGGATTCCACAAATATTGTAAc > 1:7528608‑M1/14‑37 (MQ=255) accaaattagacgTCAGGATTCCACAAATATTGTAAc > 1:3745051‑M1/14‑37 (MQ=255) gTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg < 1:6018604/53‑1 (MQ=255) gTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg < 1:2472886/53‑1 (MQ=255) tATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAttt < 1:6169349/50‑1 (MQ=255) tCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGa > 1:3502017/1‑38 (MQ=255) aaGCTTTTCAGGATTCCACAAATATTGTAACCCTGa > 1:888588/1‑36 (MQ=255) aaGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg > 1:7362285/1‑48 (MQ=255) aaGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg > 1:6652960/1‑48 (MQ=255) aaGCTTTTCAGGATTCCACAAATATAGTAACCCTGa > 1:6644043/1‑36 (MQ=255) aGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAttt < 1:7029760/45‑1 (MQ=255) aGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAAt > 1:5468624/1‑43 (MQ=255) aGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTa < 1:2615310/71‑1 (MQ=255) aGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTa < 1:1828237/71‑1 (MQ=255) gCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACa < 1:6630668/56‑1 (MQ=255) gCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACa < 1:3594072/56‑1 (MQ=255) gCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACa < 1:6163319/56‑1 (MQ=255) gCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTaa > 1:6288951/1‑71 (MQ=255) gCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTaa > 1:5829184/1‑71 (MQ=255) cTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGt < 1:6999473/46‑1 (MQ=255) cTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGt < 1:5935317/46‑1 (MQ=255) ttttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTtata < 1:1059967/49‑1 (MQ=255) tttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACg > 1:2822499/1‑70 (MQ=255) tttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACg > 1:353517/1‑70 (MQ=255) ttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACt > 1:3670110/1‑65 (MQ=255) ttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACg < 1:2297122/69‑1 (MQ=255) ttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGt > 1:4057851/1‑70 (MQ=255) ttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGt > 1:4564164/1‑70 (MQ=255) | TCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTA > W3110S.gb/2763865‑2764004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |