| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3064697 | 156 (1.920) | 18 (0.230) | 8/94 | NT | 11.2% | coding (1240/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase |
| ? | W3110S.gb | = 3064731 | 136 (1.740) | coding (1274/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase | |||||
Only 100 of 221 total aligned reads displayed.
TCGATCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTC > W3110S.gb/3064628‑3064767 | gATCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGtt > 1:5442970/1‑70 (MQ=255) aTCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa > 1:2591601/1‑71 (MQ=255) ttATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATca > 1:5600888/1‑70 (MQ=255) tATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATca < 1:4180617/69‑1 (MQ=255) tATGGCCCCGTCGATTCCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTg < 1:1940632/65‑1 (MQ=255) ccccGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGaa < 1:327524/71‑1 (MQ=255) cccGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGaa < 1:1185579/70‑1 (MQ=255) cccGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAac < 1:4651499/71‑1 (MQ=255) ccGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGAt < 1:2937582/60‑1 (MQ=255) ccGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGAt < 1:103870/60‑1 (MQ=255) cGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAaca > 1:6120726/1‑70 (MQ=255) cGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAaca > 1:7314376/1‑70 (MQ=255) tCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTg > 1:2853549/1‑55 (MQ=255) tCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTg > 1:199841/1‑55 (MQ=255) tCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAg > 1:682842/1‑71 (MQ=255) tCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAg > 1:3876187/1‑71 (MQ=255) ttGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATcac < 1:2775009/56‑1 (MQ=255) ttGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCg < 1:4465746/60‑1 (MQ=255) ttGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCg < 1:3422582/60‑1 (MQ=255) ttGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGt > 1:3313675/1‑70 (MQ=255) tGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa > 1:7662576/1‑51 (MQ=255) tGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa > 1:4308329/1‑51 (MQ=255) cTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCa > 1:5051903/1‑69 (MQ=255) tAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGt < 1:3223485/45‑1 (MQ=255) tAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGt < 1:7541830/45‑1 (MQ=255) tAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGt < 1:7217282/45‑1 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGt > 1:24989/1‑70 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGt < 1:7910247/70‑1 (MQ=255) aagaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATG > 1:3716864‑M1/1‑42 (MQ=255) agaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGaa > 1:2112715/1‑55 (MQ=255) agaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGa > 1:707830/1‑71 (MQ=255) gaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGtt > 1:4226503/1‑42 (MQ=255) gaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGat > 1:3123146/1‑71 (MQ=255) gaagGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGat > 1:5746389/1‑71 (MQ=255) agGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGttgatcactttgacgctgtgttcgctgtgatca < 1:5495466‑M1/71‑34 (MQ=255) agGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatca > 1:497567/1‑71 (MQ=255) ggCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgtgatcaa > 1:2226008‑M1/1‑37 (MQ=255) cAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGt > 1:5688309/1‑63 (MQ=255) cAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATca < 1:2347997‑M2/71‑3 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa < 1:4841935/38‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa < 1:6459689/38‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGa < 1:6205224/38‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCg < 1:7007925/46‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCg < 1:1617676/46‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:7260112/68‑1 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGttgatcactttgacgctgtgttcgctgtgatca > 1:376927‑M1/1‑32 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGttgatcactttgacgctgtgttcgctgtgatca > 1:386387‑M1/1‑32 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGc > 1:5863076/1‑52 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGc > 1:6658031/1‑52 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCg < 1:3055389/71‑1 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCg < 1:6045086/71‑1 (MQ=255) aTCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGa < 1:7798532/61‑1 (MQ=255) tctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGaa > 1:1124262/1‑71 (MQ=255) ctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGaa > 1:6477115/1‑43 (MQ=255) ctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGa > 1:6621007/1‑59 (MQ=255) cAACCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgt > 1:7688538‑M1/1‑27 (MQ=255) cAACCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgt > 1:1105185‑M1/1‑27 (MQ=255) cAACCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgt > 1:5613768‑M1/1‑27 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgtgatcaacatggc < 1:5903310‑M1/66‑41 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGatgatcactttgacgctgtgttcgctgtgatcaacatggc < 1:5432542‑M1/66‑41 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:7850306/69‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:5925172/1‑71 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:3537272/1‑71 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGATGATCACAGCGAacac > 1:7413226/1‑43 (MQ=255) aCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg < 1:326142/71‑1 (MQ=255) aCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:1493079/1‑71 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAg > 1:679680/1‑43 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAggg < 1:6989178/71‑1 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:4104023/1‑70 (MQ=255) acgtcgtGCCAATGTGCAGCCAAGTAGATCACAGCGAACACAGCGTCAAAg > 1:655728/2‑51 (MQ=255) cgtcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCa < 1:2100001/47‑1 (MQ=255) cgtcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCa < 1:4486429/47‑1 (MQ=255) cgtcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGa < 1:6335081/71‑1 (MQ=255) tcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATc > 1:2564682/1‑71 (MQ=255) cgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATc < 1:844631/70‑1 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGAttg < 1:6688541/70‑3 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGa < 1:5200439/71‑1 (MQ=255) cAATGTGCAGCCATGatgatcactttgacgctgtgttcgc < 1:4987625‑M1/40‑26 (MQ=255) cAATGTGCAGCCATGatgatcactttgacgctgtgttcgc < 1:4596447‑M1/40‑26 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCa > 1:532494/1‑37 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCgc > 1:2284919/1‑67 (MQ=255) tgtgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCg < 1:1686492/51‑1 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc < 1:2651869/48‑1 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTgcg > 1:747292/1‑71 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAAc < 1:2688430/51‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAAc < 1:5422480/51‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:4265390/52‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:2042123/52‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTgcgc > 1:7634405/1‑71 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:2797818/71‑1 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:7374759/71‑1 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg > 1:2001895/1‑71 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:1531630/71‑1 (MQ=255) aGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCgg < 1:1305587/71‑1 (MQ=255) aGCCATGTTGATCACAGCGAACACACCGTCAAAGTGATCATCACCGAACAAGGGATCGcc > 1:1884869/1‑60 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCg > 1:5096137/1‑57 (MQ=255) tGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCttt < 1:6745494/71‑1 (MQ=255) gatgatcactttgacgctgtgttcgctgtgatcaacatggctgcacattggcacgacggtt < 1:1429741‑M1/61‑61 (MQ=255) gTTGATCACAGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttgagatcttgc < 1:3243855‑M2/71‑37 (MQ=255) gTTGATCACAGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttgagatcttgc < 1:3275719‑M2/71‑37 (MQ=255) | TCGATCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTC > W3110S.gb/3064628‑3064767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |