| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3141945 = | 118 (1.450) | 9 (0.130) | 3/86 | NT | 8.4% | coding (876/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component |
| ? | W3110S.gb | 3141978 = | 92 (1.290) | coding (843/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component | |||||
Only 100 of 200 total aligned reads displayed.
GGAACAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGAT > W3110S.gb/3141875‑3142013 | ggAACAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAgg < 1:1401133/71‑1 (MQ=255) gAACAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAgg < 1:506665/70‑1 (MQ=255) gAACAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGa > 1:7811571/1‑71 (MQ=255) gAACAGCATGCGGGAATCATTACGCAGCTTCGCAACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGa < 1:2346249/71‑1 (MQ=255) cgattttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGAc > 1:2534492‑M1/69‑71 (MQ=255) aCAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACt > 1:4647763/1‑71 (MQ=255) aCAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACt > 1:2024817/1‑71 (MQ=255) cAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACtt > 1:3098485/1‑71 (MQ=255) cAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACtt > 1:7538874/1‑71 (MQ=255) cAGCATGCAGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACtt < 1:5747673/71‑1 (MQ=255) ttttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtg < 1:6808298‑M1/1‑1 (MQ=255) ttttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGACTTc > 1:5502190‑M1/66‑71 (MQ=255) aGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTc < 1:2986155/71‑1 (MQ=255) tttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGa < 1:4944455‑M1/2‑1 (MQ=255) tttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGACTTc < 1:6312519‑M1/6‑1 (MQ=255) tttcatcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGACTTc < 1:4835991‑M1/6‑1 (MQ=255) gCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTc > 1:7472420/1‑70 (MQ=255) gCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTc > 1:3755579/1‑70 (MQ=255) gCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATc > 1:6060149/1‑70 (MQ=255) tcgtgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGACTTc < 1:5443452‑M1/6‑1 (MQ=255) ggAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAg < 1:5463372/70‑1 (MQ=255) tgctgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGACTTc > 1:1348232‑M1/57‑62 (MQ=255) aaTCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGaa > 1:621889/1‑70 (MQ=255) aTCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGaa > 1:385979/1‑69 (MQ=255) aTCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACa > 1:4230680/1‑71 (MQ=255) tgcgctttggcgagcttatctatcgcgacaagctgtcgttagcgtttgccggtGa > 1:2166991‑M1/54‑55 (MQ=255) tCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACtt < 1:6607316/58‑1 (MQ=255) tCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACAt < 1:193405/71‑1 (MQ=255) tCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACAt > 1:4955703/1‑71 (MQ=255) cATTACGCAGCTTCGCCACACGCAGAACGACCAGCGTGAAGAGCATCAGCAGGACTTc < 1:3261026/58‑1 (MQ=255) cATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTc < 1:7116435/58‑1 (MQ=255) cATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTc < 1:5714080/58‑1 (MQ=255) tACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGa > 1:2716879/1‑51 (MQ=255) tACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGa > 1:153944/1‑51 (MQ=255) tACGCAGCTTCGCCACACGCAGAACGACAAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACg > 1:2690016/1‑71 (MQ=255) aCGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACg > 1:4168506/1‑70 (MQ=255) cGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACg > 1:1678167/1‑69 (MQ=255) cGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACg > 1:3945366/1‑69 (MQ=255) cGCAGCTTCGCCACACGCAGAACGACCAGC‑‑GAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAg < 1:2922277/70‑1 (MQ=255) gCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCATCAGGAc < 1:7656767/49‑1 (MQ=255) gCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACtt < 1:7183820/51‑1 (MQ=255) aGCTTCGCCACACGCAGAACGCCCAGCGGGAAGAGCATCAGCAGGAc > 1:577833/1‑47 (MQ=255) gCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATc < 1:6930761/62‑1 (MQ=255) gCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAg < 1:5742539/71‑1 (MQ=255) cTTCGCCACACGCAGAACGACGAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACgg < 1:922807/65‑1 (MQ=255) cTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACgg < 1:5039874/65‑1 (MQ=255) gcttatctatcgcgacaagctgtcgttagcgtttgccggtGa < 1:5666115‑M1/2‑1 (MQ=255) gcttatctatcgcgacaagctgtcgttagcgtttgccggtGa < 1:7254972‑M1/2‑1 (MQ=255) cGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCAc > 1:5332648/1‑60 (MQ=255) cGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGt > 1:2891836/1‑71 (MQ=255) tatctatcgcgacaagctgtcgttagcgtttgccggtGACtt > 1:410245‑M1/38‑42 (MQ=255) cacaCGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCAc < 1:6573131/71‑1 (MQ=255) tctatcgcgacaagctgtcgttagcgtttgccggtGACTTCAATCCAGAACATCACGGAg > 1:6955457‑M1/36‑60 (MQ=255) tctatcgcgacaagctgtcgttagcgtttgccggtGACTTCAATCCAGAACATCACGGAg > 1:1032989‑M1/36‑60 (MQ=255) tctatcgcgacaagctgtcgttagcgtttgccggtGACTTCAATCCAGAACATCACGGAg > 1:1115478‑M1/36‑60 (MQ=255) tctatcgcgacaagctgtcgttagcgtttgccggtGACTTCAATCCAGAACATCACGGAg > 1:2407984‑M1/36‑60 (MQ=255) acacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAAGATCACg > 1:61406/1‑57 (MQ=255) acacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACg > 1:5226854/1‑57 (MQ=255) acacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGa > 1:2776713/1‑64 (MQ=255) acacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCAcc > 1:158046/1‑71 (MQ=255) ctatcgcgacaagctgtcgttagcgtttgccggtGa < 1:3426667‑M1/2‑1 (MQ=255) cacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCg < 1:5558551/71‑1 (MQ=255) acGCAGAACGACCAGCGGGAAGAGCATCAGCAGGa > 1:7772392/1‑35 (MQ=255) acGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCgg > 1:2126243/1‑71 (MQ=255) tcgcgacaagctgtcgttagcgtttgccggtGACTTc > 1:1264581‑M1/32‑37 (MQ=255) cAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGaa > 1:3411002/1‑45 (MQ=255) cgacaagctttcgttagcgtttgccggtGACTTCAATCCATAACATCACGGAGTAg > 1:6789926‑M1/29‑56 (MQ=255) cgacaagctgtcgttagcgtttgccggtGACTTCAATCCAGAACATCACGGAGTAg > 1:6781656‑M1/29‑56 (MQ=255) aaagACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACg > 1:3810164/4‑71 (MQ=255) aaCGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGaa > 1:1712721/1‑57 (MQ=255) aaCGACCAGCGGCAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACg > 1:1182283/1‑71 (MQ=255) aCGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACg > 1:7325781/1‑70 (MQ=255) aCGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGc > 1:3992269/1‑71 (MQ=255) cGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGc > 1:2226315/1‑70 (MQ=255) cGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACa < 1:5988555/71‑1 (MQ=255) ggAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAg < 1:473255/70‑1 (MQ=255) gAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCt > 1:4361747/1‑71 (MQ=255) agagCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTg > 1:3558176/1‑71 (MQ=255) gCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAg < 1:7783859/38‑1 (MQ=255) gCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAg < 1:75739/38‑1 (MQ=255) gCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAg < 1:6415688/38‑1 (MQ=255) cATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:6177439/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgcg < 1:2592771/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgcg < 1:3921344/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc > 1:3667115/1‑70 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:1011365/68‑1 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:2566310/68‑1 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:731908/1‑70 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:4861773/1‑70 (MQ=255) agcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:2794891/1‑69 (MQ=255) agcagGACATCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTg < 1:7599107/63‑1 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:287216/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:7495455/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:6012936/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:3485545/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:527488/1‑52 (MQ=255) agGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGt > 1:2040330/1‑61 (MQ=255) agGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGt > 1:4920652/1‑61 (MQ=255) ggACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagat > 1:3115310/1‑70 (MQ=255) GACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGc > 1:3700635‑M1/1‑55 (MQ=255) | GGAACAGCATGCGGGAATCATTACGCAGCTTCGCCACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGAT > W3110S.gb/3141875‑3142013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |