| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3141945 = | 118 (1.450) | 9 (0.130) | 3/86 | NT | 8.4% | coding (876/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component |
| ? | W3110S.gb | 3141978 = | 92 (1.290) | coding (843/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component | |||||
Only 100 of 182 total aligned reads displayed.
CACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGCC > W3110S.gb/3141909‑3142047 | cacaCGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCAc < 1:6573131/71‑1 (MQ=255)cacaCGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCAc < 1:3229699/71‑1 (MQ=255) acacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCAcc > 1:7633628/1‑71 (MQ=255) cacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCg < 1:5558551/71‑1 (MQ=255) cacGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCg > 1:7095496/1‑71 (MQ=255) acGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCgg > 1:2126243/1‑71 (MQ=255) acGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCgg > 1:2781285/1‑71 (MQ=255) aCGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACg > 1:7325781/1‑70 (MQ=255) aCGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGc > 1:3992269/1‑71 (MQ=255) cGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGc > 1:2226315/1‑70 (MQ=255) cGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACa < 1:5988555/71‑1 (MQ=255) ggAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCaaa > 1:6530619/1‑58 (MQ=255) ggAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAg < 1:473255/70‑1 (MQ=255) gAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAg > 1:5270884/1‑69 (MQ=255) gAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCt < 1:5613466/71‑1 (MQ=255) gAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCt < 1:2039512/71‑1 (MQ=255) agagCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCtt < 1:7554136/70‑1 (MQ=255) agagCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTg < 1:5524176/71‑1 (MQ=255) cATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:3944602/71‑1 (MQ=255) cATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:6177439/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgcg < 1:3539608/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgcg < 1:2592771/71‑1 (MQ=255) aTCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc > 1:6180226/1‑70 (MQ=255) ctgcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCaa < 1:4945233/45‑1 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:1011365/68‑1 (MQ=255) cagcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:2566310/68‑1 (MQ=255) agcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTg < 1:7768421/63‑1 (MQ=255) agcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:2794891/1‑69 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:6012936/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:527488/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:7495455/1‑52 (MQ=255) gcagGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTaa > 1:3485545/1‑52 (MQ=255) agGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGt > 1:4920652/1‑61 (MQ=255) GACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGc > 1:1399577‑M1/1‑55 (MQ=255) GACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGc > 1:3700635‑M1/1‑55 (MQ=255) CTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGc > 1:5482391‑M1/1‑71 (MQ=255) TTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGAc > 1:3614758‑M1/1‑49 (MQ=255) TTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc > 1:7040909‑M1/1‑59 (MQ=255) TTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc > 1:4598067‑M1/1‑59 (MQ=255) TTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagat > 1:7432784‑M1/1‑66 (MQ=255) TCAATCCTGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCtt > 1:6970401‑M1/1‑53 (MQ=255) TCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCtt > 1:1319837‑M1/1‑53 (MQ=255) ctactccgtgatgttctggattgaagtcACCGGCAAACGCTAACGACAGCTTGTcg > 1:6781656‑M2/29‑56 (MQ=255) ctactccgtgatgttctggattgaagtcACCGGCAAACGCTAACGACAGCTTGTcg > 1:3848954‑M2/29‑56 (MQ=255) ctactccgtgatgttatggattgaagtcACCGGCAAACGCTAACGAAAGCTTGTcg > 1:6789926‑M2/29‑56 (MQ=255) CAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagata > 1:6674338‑M1/1‑65 (MQ=255) CAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagata > 1:6468032‑M1/1‑65 (MQ=255) CAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagata > 1:5646635‑M1/1‑65 (MQ=255) CAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgata < 1:1151849‑M1/61‑1 (MQ=255) CAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCg < 1:5341990‑M1/71‑1 (MQ=255) tCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgat > 1:4410616/1‑57 (MQ=255) ctccgtgatgttctggattgaagtcACCGGCAAACGCTAACGACAGCTTGTCGCgataga > 1:1032989‑M2/26‑60 (MQ=255) ctccgtgatgttctggattgaagtcACCGGCAAACGCTAACGACAGCTTGTCGCgataga > 1:2407984‑M2/26‑60 (MQ=255) ccAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCa > 1:1581024/1‑70 (MQ=255) ccAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCa > 1:1674632/1‑70 (MQ=255) cAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCa > 1:2681733/1‑69 (MQ=255) aGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAg < 1:7061127/71‑1 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAg > 1:1210878/1‑59 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg > 1:2293710/1‑71 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg > 1:4009739/1‑71 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg > 1:1868535/1‑71 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg > 1:3329706/1‑71 (MQ=255) aaCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg < 1:1723554/71‑1 (MQ=255) aCATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcgc < 1:7321775/71‑1 (MQ=255) cATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg > 1:2695777/1‑69 (MQ=255) tgttctggattgaagtcACCGGCAAACGCTAACGACAGCTTGt < 1:219463‑M2/26‑1 (MQ=255) aTCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:3221083/46‑1 (MQ=255) cACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCgcagca > 1:3201507/1‑71 (MQ=255) cACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCgcagca > 1:4194770/1‑71 (MQ=255) tcGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgcg < 1:6918332/43‑1 (MQ=255) aCGGAGTAGAAGTCACCGGCAAACGCTAACGACAGc > 1:7718196/1‑36 (MQ=255) aCGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCgcagca < 1:5110718/70‑1 (MQ=255) cGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcg > 1:2133745/1‑41 (MQ=255) cGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgatagata > 1:6838244/1‑50 (MQ=255) cGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgataga > 1:1112722/1‑48 (MQ=255) gAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTcgc < 1:7469877/40‑1 (MQ=255) gAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGAt > 1:6257099/1‑71 (MQ=255) aGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATg < 1:2397702/71‑1 (MQ=255) aGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATg < 1:1527694/71‑1 (MQ=255) aGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCgataga < 1:195926/42‑1 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:3432663‑M2/7‑37 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:5435904‑M2/7‑37 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:3106002‑M2/7‑37 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCga > 1:7118724‑M2/7‑37 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGa < 1:5443452‑M2/59‑1 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaaa < 1:474499‑M2/65‑1 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaaa > 1:1266306‑M2/7‑71 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaa < 1:6312519‑M2/64‑1 (MQ=255) gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaa < 1:4835991‑M2/64‑1 (MQ=255) aagtcACCGGCAAACGCTAACGACAGCTTGTCGCgatagata > 1:410245‑M2/6‑42 (MQ=255) aagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg < 1:57761‑M2/51‑1 (MQ=255) gtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAgcg < 1:7307783‑M2/51‑1 (MQ=255) gtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCg > 1:5703092‑M2/4‑71 (MQ=255) gtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCg > 1:2534492‑M2/4‑71 (MQ=255) tcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCgca > 1:2166991‑M2/3‑55 (MQ=255) tcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGc > 1:2990704‑M2/3‑71 (MQ=255) cACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaaa < 1:6808298‑M2/65‑1 (MQ=255) cACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGaaaa < 1:4996080‑M2/65‑1 (MQ=255) aCCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGcc < 1:4694685/70‑1 (MQ=255) aCCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGc > 1:1841293/1‑69 (MQ=255) | CACACGCAGAACGACCAGCGGGAAGAGCATCAGCAGGACTTCAATCCAGAACATCACGGAGTAGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGCC > W3110S.gb/3141909‑3142047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |