| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3291382 = | 119 (1.460) | 6 (0.080) | 4/90 | NT | 5.2% | coding (187/1092 nt) | yraK | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | 3291413 = | 111 (1.480) | coding (218/1092 nt) | yraK | predicted fimbrial‑like adhesin protein | |||||
Only 100 of 158 total aligned reads displayed.
GTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCC > W3110S.gb/3291313‑3291452 | gTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAg < 1:4410198/71‑1 (MQ=255)ctttctgatgtccagtggtggtaagtacggggctgaccatatagacaagtttaactgccttacccgcagag > 1:6147291‑M1/70‑71 (MQ=255)ctgtctgatgtccagtggtggtaagtacggggctgaccatatagacaagtttaactgccttacccgcagag < 1:7711317‑M1/2‑1 (MQ=255) ttGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTa > 1:5244074/1‑69 (MQ=255) tgatgaTGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCa > 1:903247/1‑71 (MQ=255) tgatgaTGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCa > 1:4825453/1‑71 (MQ=255) tctgatgtccagtggtggtaagtacggggctgaccatatagacaagtttaactgccttacccgcagAGc > 1:5714066‑M1/67‑69 (MQ=255) atgatgTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACt < 1:1703190/71‑1 (MQ=255) tgTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACt < 1:6790223/71‑1 (MQ=255) gTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTg > 1:862295/1‑71 (MQ=255) ttACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGc < 1:1817921/62‑1 (MQ=255) ttACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTg < 1:3231963/70‑1 (MQ=255) ttACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTg < 1:7673942/70‑1 (MQ=255) ttACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTg < 1:2107178/70‑1 (MQ=255) tACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTgg > 1:1292380/1‑70 (MQ=255) tACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTgg > 1:4429916/1‑70 (MQ=255) aCGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCAc > 1:3055978/1‑62 (MQ=255) aCGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGc < 1:724918/70‑1 (MQ=255) aCGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGc > 1:6570992/1‑70 (MQ=255) ggTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTa < 1:701411/62‑1 (MQ=255) aCCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGcc > 1:7880504/1‑71 (MQ=255) ccAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGc < 1:1322041/69‑1 (MQ=255) ccAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGc < 1:5994903/69‑1 (MQ=255) agacagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGt > 1:3969972/1‑71 (MQ=255) gacagaTAACGTGACAGGACGTGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATAc < 1:2608889/64‑1 (MQ=255) gacagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGtt < 1:5565144/71‑1 (MQ=255) gacagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGt > 1:821585/1‑70 (MQ=255) acagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCaa < 1:1239457/60‑1 (MQ=255) acagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCaa < 1:5936413/60‑1 (MQ=255) acagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTc < 1:6910390/71‑1 (MQ=255) cagaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTcc < 1:1543530/71‑1 (MQ=255) agaTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACt < 1:3228815/53‑1 (MQ=255) aTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTaa < 1:150651/49‑1 (MQ=255) aTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTaa > 1:70735/1‑49 (MQ=255) aTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGc > 1:707290/1‑71 (MQ=255) aTAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGc > 1:3860871/1‑71 (MQ=255) aaCGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATAAGCCTGTTCCTGc > 1:2351196/1‑69 (MQ=255) ctgaccatatagacaagtttaactgccttacccgcagAGCa < 1:11847‑M1/4‑1 (MQ=255) cGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct > 1:4241645/1‑70 (MQ=255) gTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCa > 1:2253265/1‑40 (MQ=255) tGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCg < 1:2780368/71‑1 (MQ=255) gACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGc < 1:3780018/37‑1 (MQ=255) gACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCgg > 1:1036002/1‑71 (MQ=255) ccatatagacaagtttaactgccttacccgcagAGCa > 1:6279314‑M1/34‑37 (MQ=255) ccatatagacaagtttaactgccttacccgcagAGCa > 1:1030495‑M1/34‑37 (MQ=255) tatagacaagtttaactgccttacccgcagAGCACTAACTGGCAATACGCCTGTTCCTGctct > 1:470563‑M1/31‑63 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGcc < 1:4931318/50‑1 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg > 1:3558386/1‑71 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg > 1:3609627/1‑71 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg > 1:798270/1‑71 (MQ=255) cGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGc < 1:7144998/71‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACt < 1:2489130/36‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGc < 1:848744/39‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGc < 1:6514133/39‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGc < 1:3750531/39‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTa < 1:7363976/66‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGc < 1:5991105/70‑1 (MQ=255) ggAGTTTACCTCTGCAACGCTAAGTAGCACTAACt < 1:5271966/35‑1 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt > 1:4624857/1‑71 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt > 1:1411233/1‑71 (MQ=255) aagtttaactgccttacccgcagAGCACTAACTGGCAATACGCCTGTTCCt < 1:4137884‑M1/28‑1 (MQ=255) gTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTa < 1:7514133/71‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct < 1:5775696/54‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct < 1:6970425/54‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGc > 1:3766274/1‑56 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGc > 1:1445901/1‑56 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTa > 1:2920207/1‑70 (MQ=255) gtttaactgccttacccgcagAGCACTAACTGGCAATACGCCTGTTc > 1:5510154‑M1/22‑47 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATa > 1:7310579/1‑36 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATa > 1:2152498/1‑36 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTcc > 1:3529296/1‑46 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTaa > 1:6891659/1‑60 (MQ=255) aCCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAAc < 1:4752719/70‑1 (MQ=255) tctGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCgg > 1:6211004/1‑52 (MQ=255) ctGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTc > 1:4669949/1‑71 (MQ=255) tGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTaa < 1:4153627/63‑1 (MQ=255) tGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTc > 1:7104365/1‑70 (MQ=255) tGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGCTAAGGCAGTTaa < 1:3961944/63‑1 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTaa < 1:5333897/61‑1 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:317242/1‑70 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:1125989/1‑70 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:4037137/1‑70 (MQ=255) aaCGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCtata < 1:4099593/71‑1 (MQ=255) tacccgcagAGCACTAACTGGCAATACGCCTGTTCCTg < 1:5572161‑M1/29‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctc < 1:2382637/40‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctc < 1:6445645/40‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAgg > 1:3785173/1‑51 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATg < 1:1881952/71‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATg > 1:6206805/1‑71 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATg > 1:1669225/1‑71 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg < 1:3981885/71‑1 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg > 1:1427164/1‑71 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg < 1:6273566/71‑1 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg > 1:304391/1‑71 (MQ=255) cTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGc < 1:6859884/41‑1 (MQ=255) aGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGt > 1:775380/1‑59 (MQ=255) gTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta < 1:3194171/61‑1 (MQ=255) gTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta < 1:2464740/61‑1 (MQ=255) tAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg < 1:4624294/43‑1 (MQ=255) tAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGcc < 1:694078/71‑1 (MQ=255) | GTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCC > W3110S.gb/3291313‑3291452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |