| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3291382 = | 119 (1.460) | 6 (0.080) | 4/90 | NT | 5.2% | coding (187/1092 nt) | yraK | predicted fimbrial‑like adhesin protein |
| ? | W3110S.gb | 3291413 = | 111 (1.480) | coding (218/1092 nt) | yraK | predicted fimbrial‑like adhesin protein | |||||
Only 100 of 153 total aligned reads displayed.
CGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAG > W3110S.gb/3291345‑3291481 | cGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct > 1:4241645/1‑70 (MQ=255) gACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCgg > 1:1045637/1‑71 (MQ=255) aGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGt > 1:464474/1‑70 (MQ=255) tatagacaagtttaactgccttacccgcagAGCACTAACTGGCAATACGCCTGTTCCTGctct > 1:470563‑M1/31‑63 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg > 1:3609627/1‑71 (MQ=255) gACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg > 1:798270/1‑71 (MQ=255) aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAgg < 1:3553839/71‑1 (MQ=255) gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTa < 1:7363976/66‑1 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt > 1:1411233/1‑71 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt < 1:6155919/71‑1 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt < 1:7218238/71‑1 (MQ=255) gAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGt < 1:6540994/71‑1 (MQ=255) gTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGtt > 1:5037301/1‑70 (MQ=255) gTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGtt > 1:3784943/1‑70 (MQ=255) gTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTa < 1:7514133/71‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct < 1:5775696/54‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctct < 1:6970425/54‑1 (MQ=255) tttACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTa > 1:2920207/1‑70 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTaa > 1:6891659/1‑60 (MQ=255) tACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAAc > 1:3972270/1‑71 (MQ=255) aCCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAAc < 1:4752719/70‑1 (MQ=255) tctGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCgg > 1:6211004/1‑52 (MQ=255) tGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTaa < 1:3768320/63‑1 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTaa < 1:5333897/61‑1 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTc < 1:7101419/68‑1 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:317242/1‑70 (MQ=255) cAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:1125989/1‑70 (MQ=255) aaCGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCtata < 1:4099593/71‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGctc < 1:2382637/40‑1 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAgg > 1:5536662/1‑51 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATg > 1:1669225/1‑71 (MQ=255) cGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATg < 1:1881952/71‑1 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg > 1:1427164/1‑71 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg < 1:3981885/71‑1 (MQ=255) gCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg < 1:6273566/71‑1 (MQ=255) cTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGc < 1:6859884/41‑1 (MQ=255) cTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGt > 1:3667618/1‑71 (MQ=255) aGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGt > 1:5306150/1‑59 (MQ=255) aGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTc < 1:1807960/69‑1 (MQ=255) aGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCa < 1:7309931/70‑1 (MQ=255) gTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta < 1:2464740/61‑1 (MQ=255) tAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAg < 1:4624294/43‑1 (MQ=255) tAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGcc < 1:694078/71‑1 (MQ=255) tAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGcc < 1:6046808/71‑1 (MQ=255) GCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCa < 1:5742594‑M1/66‑1 (MQ=255) caggaacaggcgtattgccagttagtgctCTGCGGGTa < 1:5943175‑M2/9‑1 (MQ=255) caggaacaggcgtattgccagttagtgctCTGCGGGTa < 1:5572161‑M2/9‑1 (MQ=255) CACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCg > 1:6392158‑M1/1‑71 (MQ=255) CACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCg > 1:7498375‑M1/1‑71 (MQ=255) CACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCg > 1:888297‑M1/1‑71 (MQ=255) aggaacaggcgtattgccagttagtgctCTGCGGGTAAGGCAGTTAAACtt < 1:4137884‑M2/23‑1 (MQ=255) cTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTCTCTATATGGTCAGCCCCg > 1:2818904/1‑69 (MQ=255) gaacaggcgtattgccagttagtgctCTGCGGGTAAGGCAGTTAAAc > 1:2513242‑M2/27‑47 (MQ=255) gaacaggcgtattgccagttagtgctCTGCGGGTAAGGCAGTTAAAc > 1:5510154‑M2/27‑47 (MQ=255) aaCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTa > 1:211760/1‑69 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAAc > 1:7852715/1‑45 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAAc > 1:1045387/1‑45 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGcc > 1:5943380/1‑63 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGcc > 1:4725942/1‑63 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACtt < 1:3540020/71‑1 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACt > 1:1720475/1‑70 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACt < 1:6754112/70‑1 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACt > 1:3882563/1‑70 (MQ=255) aCTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACt > 1:4430211/1‑70 (MQ=255) ggCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCg > 1:4694790/1‑63 (MQ=255) ggCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCg > 1:1253835/1‑63 (MQ=255) gCAATACGCCTGTTCCTGCTCTTCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTac < 1:2772428/69‑1 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:76946/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:1486135/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:3255872/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:3295303/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:6411894/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:7757270/1‑71 (MQ=255) gCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTac < 1:4868623/69‑1 (MQ=255) aaTACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCta > 1:3158581/1‑46 (MQ=255) aaTACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTa > 1:7890771/1‑62 (MQ=255) aaTACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTaccacc < 1:6126740/71‑1 (MQ=255) aTACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTAccacca > 1:3937419/1‑71 (MQ=255) tACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACtt < 1:4440959/39‑1 (MQ=255) aCGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTg > 1:7106908/1‑39 (MQ=255) aCGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTCGTCtat < 1:12556/44‑1 (MQ=255) gCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACtt < 1:1490071/60‑1 (MQ=255) gCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTac < 1:4537649/62‑1 (MQ=255) ccTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACt > 1:715364/1‑68 (MQ=255) cTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:4257397/1‑62 (MQ=255) cTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:7575135/1‑62 (MQ=255) cTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTacca > 1:7584124/1‑62 (MQ=255) tGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCtat < 1:102501/39‑1 (MQ=255) ttCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTatat > 1:7031780/1‑39 (MQ=255) tCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTa > 1:5117122/1‑51 (MQ=255) tCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTa > 1:3804103/1‑55 (MQ=255) ccTGCTCTGCGGGTAAGGCAGTTAAACTTGTCtat > 1:6037050/1‑35 (MQ=255) ccTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACAt > 1:6214943/1‑68 (MQ=255) tgctCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg > 1:1030495‑M2/5‑37 (MQ=255) tgctCTGCGGGTAAGGCAGTTAAACTTGTCTATATgg > 1:6279314‑M2/5‑37 (MQ=255) tgctCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAg < 1:11847‑M2/37‑1 (MQ=255) gctCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGa > 1:5714066‑M2/4‑69 (MQ=255) ctCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAg < 1:7711317‑M2/69‑1 (MQ=255) ctCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGAAAg > 1:6147291‑M2/3‑71 (MQ=255) ctGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGa > 1:4669385/1‑66 (MQ=255) | CGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAG > W3110S.gb/3291345‑3291481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |