| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3462865 | 113 (1.390) | 6 (0.080) | 3/86 | NT | 6.1% | coding (735/966 nt) | birA | bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding |
| ? | W3110S.gb | = 3462891 | 84 (1.180) | coding (709/966 nt) | birA | bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding | |||||
Only 100 of 165 total aligned reads displayed.
CCAGCTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACC > W3110S.gb/3462795‑3462935 | gtgttgaagagagtgtcgttaatcaggggtggatcacgctgcaggaagcggggatcaatctcgatCGTAAt > 1:6052137‑M1/66‑71 (MQ=255)gtgttgaagagagtgtcgttaatcaggggtggatcacgctgcaggaagcggggatcaatctcgatCGTAAt > 1:1006384‑M1/66‑71 (MQ=255)gtgttgaagagagtgtcgttaatcaggggtggatcacgctgcaggaagcggggatcaatctcgatCGTAAt > 1:213381‑M1/66‑71 (MQ=255) cAGCTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAAT > 1:6282352‑M1/1‑70 (MQ=255) gCTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCa > 1:4608741/1‑71 (MQ=255) cTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCAc > 1:872142/1‑71 (MQ=255) cTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCAc < 1:2295316/71‑1 (MQ=255) ccAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTa < 1:2534928/71‑1 (MQ=255) aGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAg > 1:5247852/1‑70 (MQ=255) aGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAg > 1:4914843/1‑70 (MQ=255) aGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAg > 1:4120624/1‑70 (MQ=255) gcgcGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAAtt > 1:7028894/1‑59 (MQ=255) gcgcGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCa < 1:5001877/71‑1 (MQ=255) gcgACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATg < 1:7275578/71‑1 (MQ=255) gcgACAGATAAGGTGCCAATACTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATg > 1:357496/1‑71 (MQ=255) aGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATacgttggcggccatgctaa > 1:4021435‑M1/1‑51 (MQ=255) aGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGgccgc < 1:3151364/71‑1 (MQ=255) gATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTa > 1:467711/1‑57 (MQ=255) gATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTa > 1:5562925/1‑57 (MQ=255) gATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGgccgcc < 1:2845253/71‑1 (MQ=255) tAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCaa > 1:2394197/1‑71 (MQ=255) aGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGc > 1:4217381/1‑58 (MQ=255) aGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGc > 1:4959995/1‑58 (MQ=255) aGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACg < 1:2603026/71‑1 (MQ=255) tGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTat < 1:4423877‑M2/71‑3 (MQ=255) gCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGgc > 1:6722183/1‑59 (MQ=255) ccAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCa < 1:6833486/44‑1 (MQ=255) ccAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTAt < 1:3815182/49‑1 (MQ=255) ccAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTatta < 1:825866‑M2/71‑5 (MQ=255) cAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTattac < 1:6593693‑M2/71‑6 (MQ=255) aTCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:3015269/1‑71 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTc < 1:1514853/39‑1 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTc < 1:749669/39‑1 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:2030137/1‑70 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:6272215/1‑70 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGAt < 1:7208942/71‑1 (MQ=255) ccTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:3278955/1‑71 (MQ=255) ccTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:3676095/1‑71 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCAc > 1:2770207/1‑39 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCAc > 1:6286314/1‑39 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTAtt < 1:5730873/44‑1 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTAtt < 1:3526913/44‑1 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc < 1:2146284/70‑1 (MQ=255) tcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAg > 1:6404759/1‑44 (MQ=255) tcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:151212/1‑68 (MQ=255) tcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:7937415/1‑68 (MQ=255) tcttGTTAGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAg > 1:341291/1‑44 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATgg < 1:1862003/48‑1 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATgg < 1:2860185/48‑1 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:517739/1‑65 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgag < 1:248279/70‑1 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCga < 1:1036536/69‑1 (MQ=255) ttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCa > 1:4712167/1‑44 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:5593601/1‑70 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:2354589/1‑70 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:3978840/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:1312686/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2560628/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2081528/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:3120421/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:698211/69‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:1084255/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:6001903/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:3628390/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:2644937/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGa < 1:3780684/71‑1 (MQ=255) cGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGAt < 1:6661645/70‑1 (MQ=255) aaGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTat > 1:2847264‑M2/1‑50 (MQ=255) aaGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATccc > 1:4251939/1‑71 (MQ=255) agagTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:6186408/1‑62 (MQ=255) agagTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATcccc < 1:7250428/71‑1 (MQ=255) gagTTCCAACGCAGCACGTAATacgttggcggccatgctaatacgtgaat < 1:5144460‑M1/50‑29 (MQ=255) gagTTCCAACGCAGCACGTAATacgttggcggccatgctaatacgtgaat < 1:1783089‑M1/50‑29 (MQ=255) ttCCAACGCAGCACGTAATTCACGTATTAGAATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCtt < 1:7208080/71‑1 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:3334348/1‑56 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:5475778/1‑56 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:7803772/1‑58 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTc < 1:4572341/70‑1 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATACCCGCTTcc > 1:6176019/1‑71 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:3930472/1‑55 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCga > 1:3449318/1‑53 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2317728/56‑1 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg > 1:7738366/1‑58 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg > 1:5210227/1‑58 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTcc < 1:1808441/70‑1 (MQ=255) aaCGCAGCACGTAATacgttggcggccatgctaatacgtgaattac > 1:2292804‑M1/1‑15 (MQ=255) agcaCGTAATTCGCGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTc > 1:3869768/1‑63 (MQ=255) gcaCGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGt > 1:1964094/1‑71 (MQ=255) aCGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGa < 1:6000775/71‑1 (MQ=255) CGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGAt < 1:7377109‑M1/71‑1 (MQ=255) gTAATacgttggcggccatgctaatacgtgaattacgtgctgcgttggaactcttcgaacaagaaggattg < 1:6593693‑M1/71‑67 (MQ=255) gTAATTCACGTATTAGCATGGCCGCCAACGTattacgtgctgcgtt > 1:3488072‑M2/1‑31 (MQ=255) GTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATc > 1:2112157‑M1/1‑71 (MQ=255) tAATacgttggcggccatgctaatacgtgaattacgtgctgcgttggaactcttcgaacaagaaggattgg < 1:825866‑M1/71‑68 (MQ=255) tAATTCACGTATTAGCATGGCCGCCAACGTattacgtgctgcgtt > 1:4851337‑M2/1‑30 (MQ=255) aTacgttggcggccatgctaatacgtgaattacgtgctgcgttggaactcttcgaacaagaaggat < 1:3642631‑M1/66‑65 (MQ=255) tacgttggcggccatgctaatacgtgaattacgtgctgcgttggaactcttcgaacaagaaggattggcac > 1:7102145‑M1/1‑1 (MQ=255) TTCACGTATTAGCATGGCCGCCAACGTATTACGATc < 1:1255501‑M1/36‑1 (MQ=255) TTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCtt < 1:2943246‑M1/53‑1 (MQ=255) TTCACGTATTAGCATGGACGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAcc > 1:2977254‑M1/1‑71 (MQ=255) | CCAGCTTTTCCCAGCGCGACAGATAAGGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACC > W3110S.gb/3462795‑3462935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |