| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3462865 | 113 (1.390) | 6 (0.080) | 3/86 | NT | 6.1% | coding (735/966 nt) | birA | bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding |
| ? | W3110S.gb | = 3462891 | 84 (1.180) | coding (709/966 nt) | birA | bifunctional biotin‑[acetylCoA carboxylase] holoenzyme synthetase and DNA‑binding transcriptional repressor, bio‑5'‑AMP‑binding | |||||
Only 100 of 136 total aligned reads displayed.
GGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTCAACA > W3110S.gb/3462821‑3462961 | ggTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGt < 1:3099999/71‑1 (MQ=255) gTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTa > 1:7102145‑M2/1‑70 (MQ=255) tGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTat < 1:4423877‑M2/71‑3 (MQ=255) cAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTattac < 1:6593693‑M2/71‑6 (MQ=255) atcacgctgcaggaagcggggatcaatctcgatCGTAATTCACGTATTAGCATGGCCGCCAACGTATTACg > 1:2955141‑M1/34‑71 (MQ=255) aTCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTat < 1:3642631‑M2/66‑3 (MQ=255) aTCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:3015269/1‑71 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:3828859/1‑70 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:6272215/1‑70 (MQ=255) tCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGAt > 1:7235693/1‑71 (MQ=255) ccTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:3676095/1‑71 (MQ=255) ccTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:3278955/1‑71 (MQ=255) cttcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc < 1:2146284/70‑1 (MQ=255) tcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:7937415/1‑68 (MQ=255) tcttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATc > 1:151212/1‑68 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGa > 1:517739/1‑65 (MQ=255) cttGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCga < 1:1036536/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt < 1:2119500/70‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:5593601/1‑70 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:2354589/1‑70 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2081528/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:698211/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:3120421/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2560628/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:1312686/69‑1 (MQ=255) gTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:3978840/69‑1 (MQ=255) gTTCGAAGAGTTACAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:5309630/69‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:2644937/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:3628390/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:6001903/70‑1 (MQ=255) ttCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:5734481/70‑1 (MQ=255) tCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGa < 1:6301322/70‑1 (MQ=255) cGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGAt < 1:6661645/70‑1 (MQ=255) aaGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTat > 1:2847264‑M2/1‑50 (MQ=255) aaGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATccc > 1:4251939/1‑71 (MQ=255) agagTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:2014542/1‑62 (MQ=255) agagTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATcccc < 1:7250428/71‑1 (MQ=255) ttCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGAt < 1:6016229/53‑1 (MQ=255) ttCCAACGCAGCACGTAATTCACGTATTAGAATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCtt < 1:7208080/71‑1 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:3334348/1‑56 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:5475778/1‑56 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAtt > 1:7803772/1‑58 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTc < 1:4572341/70‑1 (MQ=255) ccAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATACCCGCTTcc > 1:6176019/1‑71 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:3521358/1‑55 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCgaga > 1:3609846/1‑55 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCga > 1:3449318/1‑53 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:2317728/56‑1 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTg > 1:7738366/1‑58 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTcc < 1:1808441/70‑1 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTcc < 1:4982442/70‑1 (MQ=255) cAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCt < 1:1055256/71‑1 (MQ=255) aaCGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTg > 1:4014269/1‑71 (MQ=255) agcaCGTAATTCGCGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTc > 1:3869768/1‑63 (MQ=255) gcaCGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGt > 1:1964094/1‑71 (MQ=255) CGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGAt < 1:7377109‑M1/71‑1 (MQ=255) GTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATc > 1:2112157‑M1/1‑71 (MQ=255) tAATTCACGTATTAGCATGGCCGCCAACGTattacgtgctgcgtt > 1:4851337‑M2/1‑30 (MQ=255) aTTCACGTATTAGCATGGCCGCCAACGTattacgtgctgcgttggaactc < 1:1783089‑M2/50‑23 (MQ=255) aTTCACGTATTAGCATGGCCGCCAACGTattacgtgctgcgttggaactc < 1:5144460‑M2/50‑23 (MQ=255) TTCACGTATTAGCATGGCCGCCAACGTATTACGATc < 1:1255501‑M1/36‑1 (MQ=255) TTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCtt < 1:2943246‑M1/53‑1 (MQ=255) TTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAcc > 1:5527643‑M1/1‑71 (MQ=255) tCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAccc > 1:203942/1‑71 (MQ=255) cACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAcccc > 1:1075593/1‑71 (MQ=255) aCGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTg > 1:2742043/1‑54 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGAt < 1:4347426/37‑1 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCt > 1:6803492/1‑70 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTg < 1:2410658/71‑1 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTg < 1:5278815/71‑1 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTg < 1:3517438/71‑1 (MQ=255) cGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTg < 1:3722054/71‑1 (MQ=255) gTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCa > 1:5437448/1‑64 (MQ=255) gTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCa > 1:5665179/1‑64 (MQ=255) gTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAc < 1:4827587/65‑1 (MQ=255) tATTAGCATGGCCGCCAACGTATTACGATCGAGATTg < 1:2306534/37‑1 (MQ=255) aTTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGa < 1:5203331/69‑1 (MQ=255) aTTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGAt > 1:3699756/1‑70 (MQ=255) aTTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCACCGCTTCCTGCAGCGTGATCCAccc > 1:4541657/1‑65 (MQ=255) ttAGCATGGCCGCCAACGTattacgtgctgcgttggaactcttcgaacaagaaggattggcaccttatct > 1:4021435‑M2/1‑19 (MQ=255) ttAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCAc < 1:839468/62‑1 (MQ=255) ttAGCATGGCCGCCAACGTATTACGATCGAGATTGACCCCCGCTTCCTGCAGCGTGATCCAc < 1:6329038/62‑1 (MQ=255) gCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAAc < 1:1657874/70‑1 (MQ=255) gCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAAc > 1:6809165/1‑70 (MQ=255) cATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACg < 1:4680610/70‑1 (MQ=255) cATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGa < 1:6644987/71‑1 (MQ=255) cATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGa < 1:6859442/71‑1 (MQ=255) tGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGaca > 1:6617410/1‑71 (MQ=255) ccgccAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACActc > 1:2042502/1‑71 (MQ=255) gccAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGAtt < 1:2440844/59‑1 (MQ=255) ccAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACActctct > 1:4840289/1‑71 (MQ=255) aaCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACActctct > 1:5009524/1‑69 (MQ=255) aaCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTctcctc < 1:3403746/71‑1 (MQ=255) aaCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCtt > 1:6930391/1‑70 (MQ=255) aaCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTc < 1:856562/71‑1 (MQ=255) aCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGAt > 1:3589685/1‑43 (MQ=255) aCGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTc < 1:1441275/70‑1 (MQ=255) cGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTCaa > 1:1848168/1‑71 (MQ=255) gTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTCaa > 1:1485667/1‑70 (MQ=255) tATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTCAaca < 1:3304382/71‑1 (MQ=255) | GGTGCCAATCCTTCTTGTTCGAAGAGTTCCAACGCAGCACGTAATTCACGTATTAGCATGGCCGCCAACGTATTACGATCGAGATTGATCCCCGCTTCCTGCAGCGTGATCCACCCCTGATTAACGACACTCTCTTCAACA > W3110S.gb/3462821‑3462961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |