| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3922869 | 75 (0.920) | 5 (0.070) | 4/84 | NT | 6.4% | coding (239/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase |
| ? | W3110S.gb | = 3922893 | 81 (1.160) | coding (215/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase | |||||
Only 100 of 143 total aligned reads displayed.
GACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAT > W3110S.gb/3922799‑3922938 | aCGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAA > 1:880755‑M1/1‑70 (MQ=255) cGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaaa < 1:2107256/71‑1 (MQ=255) tttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAAtt < 1:5995806/70‑1 (MQ=255) tttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTg < 1:3333575/71‑1 (MQ=255) tttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTg < 1:5308108/71‑1 (MQ=255) tttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTg > 1:6531670/1‑71 (MQ=255) ttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTg < 1:68289/70‑1 (MQ=255) ttCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGt > 1:4958822/1‑71 (MQ=255) tCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGt < 1:6712035/70‑1 (MQ=255) tGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCa > 1:2040860/1‑70 (MQ=255) gTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTc > 1:7245786/1‑68 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaaa < 1:1332694/62‑1 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaaa < 1:1517363/62‑1 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaaa < 1:2369189/62‑1 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTc > 1:4162916/1‑67 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATa < 1:7865525/70‑1 (MQ=255) ttAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAg < 1:3851746/71‑1 (MQ=255) aaTACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTc < 1:5035327/65‑1 (MQ=255) aaTACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGcc > 1:7718830/1‑71 (MQ=255) tACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAAtt < 1:6276364/60‑1 (MQ=255) gcGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGcc < 1:4855673/67‑1 (MQ=255) cGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaa > 1:855071/1‑55 (MQ=255) ttGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACg > 1:6856436/1‑68 (MQ=255) gCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAAt > 1:4013238/1‑51 (MQ=255) gCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACg > 1:4507027/1‑65 (MQ=255) tgtgCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGtt > 1:7729218‑M2/1‑69 (MQ=255) cATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatg > 1:7220434‑M2/1‑65 (MQ=255) aTCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatgt < 1:4275639‑M2/71‑8 (MQ=255) tCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCaaaa < 1:428615/41‑1 (MQ=255) tCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGAtgtg > 1:6661993/1‑71 (MQ=255) tCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGAtgtg < 1:6133516/71‑1 (MQ=255) cagcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGt < 1:2995285/44‑1 (MQ=255) cagcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGt < 1:332977/44‑1 (MQ=255) cagcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGACGACGGAGATCGTTGATGTgg > 1:5842972/1‑71 (MQ=255) agcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTgg > 1:561228/1‑70 (MQ=255) cagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAAt > 1:7762782/1‑38 (MQ=255) cagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCAc > 1:4552454/1‑71 (MQ=255) agAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg < 1:3238911/71‑1 (MQ=255) agAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg < 1:2978729/71‑1 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATCGACATCAAcgatctccgtcggctatgacaat < 1:2848227‑M1/56‑24 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:4118139/1‑70 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATAGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:3466198/1‑70 (MQ=255) aaTTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:7318360/1‑69 (MQ=255) aaTTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:351469/1‑69 (MQ=255) aTTTTTCGGGCGGTAAGCGCATCGACATCAAcgatctccgtcggctatgacaattt > 1:203354‑M1/1‑31 (MQ=255) tttttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGt < 1:1836961/71‑1 (MQ=255) tttttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGt < 1:1083086/71‑1 (MQ=255) ttttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGtt > 1:4855373/1‑71 (MQ=255) tttCGGGCGGTAAGCGCATCGACATCAAAATTGTc > 1:1694732/1‑35 (MQ=255) tttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGttt > 1:5563089/1‑71 (MQ=255) tttCGGGCGGTAACCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGttt > 1:5262804/1‑71 (MQ=255) ttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCa > 1:3960096/1‑66 (MQ=255) ttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGttt < 1:2160163/70‑1 (MQ=255) tCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTc < 1:1441225/70‑1 (MQ=255) cGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg < 1:2783838/70‑1 (MQ=255) cGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg < 1:3050493/70‑1 (MQ=255) ggCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGtt > 1:1522913‑M2/1‑47 (MQ=255) gCGGTAAGCGCATCGACATCAAcgatctccgtcggctatgacaattttgat > 1:1614728‑M1/1‑22 (MQ=255) gCGGTAAGCGCATCGACATCAAcgatctccgtcggctatgacaattttgat > 1:5941633‑M1/1‑22 (MQ=255) cGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttga < 1:4473969‑M2/49‑5 (MQ=255) tAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCg < 1:5698800/42‑1 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:7776351‑M2/1‑40 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:2691654‑M2/1‑40 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCAtttt > 1:1759077/1‑68 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCAtttt > 1:6638327/1‑68 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTc < 1:4931889/71‑1 (MQ=255) gcgcATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatg > 1:122438‑M2/1‑39 (MQ=255) gcgcATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTc > 1:6715699/1‑70 (MQ=255) gcATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAg > 1:7861421/1‑71 (MQ=255) cATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAg > 1:315034/1‑70 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:7473393‑M2/1‑34 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTc < 1:4058215/54‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:6626407/71‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:6970359/71‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:4249501/71‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:7398286/71‑1 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa > 1:3429901/1‑69 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:6401483/71‑1 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:7194888/71‑1 (MQ=255) aCATCAAcgatctccgtcggctatgacaattttgatgtcgatgcgcttaccgcccgaaaaattctgct < 1:2939212‑M1/68‑62 (MQ=255) aCATCAAAATTGTCATAGCCGACGGAGATCGttgatg > 1:2782111‑M2/1‑31 (MQ=255) aCATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCa > 1:60564/1‑67 (MQ=255) cATCAAcgatctccgtcggctatgacaattttgatgtcgatgcgcttaccgcccgaaaaattctgctgatg > 1:7220434‑M1/1‑6 (MQ=255) cATCAAcgatctccgtcggctatgacaattttgatgtcgatgcgc > 1:122438‑M1/1‑6 (MQ=255) cATCAAcgatctccgtcggctatgacaattttgatgtcgatgcgc > 1:1479855‑M1/1‑6 (MQ=255) aTCAAAATTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgcccgaaa < 1:2116381‑M2/57‑29 (MQ=255) aTCAAAATTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgc > 1:1614728‑M2/1‑29 (MQ=255) tCAAcgatctccgtcggctatgacaattttgatgtcgatgcgcttaccg < 1:4473969‑M1/49‑46 (MQ=255) tCAAcgatctccgtcggctatgacaattttgatgtcgatgcgcttaccg < 1:58313‑M1/49‑46 (MQ=255) cAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGc < 1:6144649/62‑1 (MQ=255) cAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCa > 1:1994327/1‑71 (MQ=255) aacgatctccgtcggctatgacaattttgatgtcgatgcgcttaccgcccgaaaaattctgctgatgcaca > 1:7729218‑M1/1‑2 (MQ=255) aacgatctccgtcggctatgacaattttgatgtcgatgcgcttaccgcccgaaaaattctgctgatgcaca > 1:798648‑M1/1‑2 (MQ=255) aacgatctccgtcggctatgacaattttgatgtcgatgcgcttaccgcc > 1:1522913‑M1/1‑2 (MQ=255) aaaaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:5095001/65‑1 (MQ=255) aaaaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:5662783/65‑1 (MQ=255) acgatctccgtcggctatgacaattttgatgtcgatgcgct > 1:1371268‑M1/1‑1 (MQ=255) acgatctccgtcggctatgacaattttgatgtcgatgcgct > 1:2691654‑M1/1‑1 (MQ=255) acgatctccgtcggctatgacaattttgatgtcgatgcgc > 1:4621499‑M1/1‑1 (MQ=255) acgatctccgtcggctatgacaattttgatgtcgaagcgc > 1:518948‑M1/1‑1 (MQ=255) | GACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAT > W3110S.gb/3922799‑3922938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |