| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3922869 | 75 (0.920) | 5 (0.070) | 4/84 | NT | 6.4% | coding (239/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase |
| ? | W3110S.gb | = 3922893 | 81 (1.160) | coding (215/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase | |||||
Only 100 of 129 total aligned reads displayed.
TGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAGTAA > W3110S.gb/3922825‑3922963 | tgtgCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGtt > 1:7729218‑M2/1‑69 (MQ=255)tgtgCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGtt > 1:798648‑M2/1‑69 (MQ=255) cATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatg > 1:7220434‑M2/1‑65 (MQ=255) tCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGAtgtg > 1:6661993/1‑71 (MQ=255) tCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGAtgtg < 1:6133516/71‑1 (MQ=255) cagcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTgg > 1:6381742/1‑71 (MQ=255) cagcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGACGACGGAGATCGTTGATGTgg > 1:5842972/1‑71 (MQ=255) agcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatgt < 1:2939212‑M2/68‑8 (MQ=255) agcagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTgg > 1:561228/1‑70 (MQ=255) cagAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCAc < 1:1583730/71‑1 (MQ=255) agAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg < 1:1775071/71‑1 (MQ=255) agAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg < 1:3238911/71‑1 (MQ=255) agAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg < 1:2978729/71‑1 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:4118139/1‑70 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:2267311/1‑70 (MQ=255) gAATTTTTCGGGCGGTAAGCGCATAGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:3466198/1‑70 (MQ=255) aaTTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACg > 1:77253/1‑69 (MQ=255) tttttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGt < 1:1836961/71‑1 (MQ=255) tttttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGt < 1:1083086/71‑1 (MQ=255) ttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCa > 1:3960096/1‑66 (MQ=255) ttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGttt < 1:2160163/70‑1 (MQ=255) ttCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGttt < 1:7216616/70‑1 (MQ=255) tCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTc < 1:1441225/70‑1 (MQ=255) cGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg < 1:2783838/70‑1 (MQ=255) ggCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGtt > 1:1522913‑M2/1‑47 (MQ=255) cGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttga < 1:4473969‑M2/49‑5 (MQ=255) cGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGttga < 1:58313‑M2/49‑5 (MQ=255) tAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCg < 1:5397690/42‑1 (MQ=255) tAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCg < 1:5698800/42‑1 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:1371268‑M2/1‑40 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:2691654‑M2/1‑40 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCAtttt > 1:6638327/1‑68 (MQ=255) aGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTc < 1:5649984/71‑1 (MQ=255) gcgcTTCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:518948‑M2/1‑39 (MQ=255) gcgcATCGACATCAAAATTGTCATAGCCGACGGAGATCGttgatg > 1:122438‑M2/1‑39 (MQ=255) gcgcATCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:4621499‑M2/1‑39 (MQ=255) gcgcATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTc > 1:6715699/1‑70 (MQ=255) gcATCGACATCAAAATTGTCATATCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg < 1:4093746/58‑1 (MQ=255) gcATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg < 1:7259638/58‑1 (MQ=255) gcATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAg > 1:7861421/1‑71 (MQ=255) cATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAg > 1:315034/1‑70 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGt > 1:7473393‑M2/1‑34 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTc < 1:4058215/54‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:6626407/71‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:7398286/71‑1 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa > 1:4861372/1‑71 (MQ=255) tCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa < 1:4249501/71‑1 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa > 1:3429901/1‑69 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAAt > 1:91211/1‑70 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:7194888/71‑1 (MQ=255) gACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:6401483/71‑1 (MQ=255) aCATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTc > 1:6660598/1‑51 (MQ=255) aCATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCa > 1:60564/1‑67 (MQ=255) aTCAAAATTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgcccgaaa < 1:2116381‑M2/57‑29 (MQ=255) aTCAAAATTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgc > 1:5941633‑M2/1‑29 (MQ=255) aTCAAAATTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgc > 1:1614728‑M2/1‑29 (MQ=255) cAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGc < 1:6144649/62‑1 (MQ=255) cAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCa > 1:1994327/1‑71 (MQ=255) aaaaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:5662783/65‑1 (MQ=255) aaaaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:5095001/65‑1 (MQ=255) aaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAtt < 1:5303613/70‑1 (MQ=255) aaTTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAtt < 1:6845877/70‑1 (MQ=255) aTTGTCATAGCCGACGGAGATCGttgatgtcgatgcgcttaccgcccgaaaaattc < 1:2848227‑M2/56‑34 (MQ=255) tGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCgg < 1:7869380/63‑1 (MQ=255) gTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCg > 1:4290325/1‑41 (MQ=255) aTAGCCGACGGAGATCGTTGATGTGGCACGGAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtc < 1:6293501/70‑1 (MQ=255) aTAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCAttt < 1:3136180/44‑1 (MQ=255) aTAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtct > 1:1659753/1‑71 (MQ=255) aTAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtct > 1:356230/1‑71 (MQ=255) aTAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtc < 1:2559998/70‑1 (MQ=255) tAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:491410/55‑1 (MQ=255) tAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtctc > 1:6760403/1‑71 (MQ=255) tAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATtctc < 1:1242425/71‑1 (MQ=255) gCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGt > 1:228380/1‑71 (MQ=255) gCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGt < 1:1427528/71‑1 (MQ=255) gCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGt > 1:4723328/1‑71 (MQ=255) ccGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGc < 1:5971137/48‑1 (MQ=255) cGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTc > 1:7701271/1‑43 (MQ=255) gACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGttt > 1:973747/1‑70 (MQ=255) aCGGAGATCGTTGATGTGGCACGCAGTTTCGGCAt < 1:7720872/35‑1 (MQ=255) aCGGAGATCGTTGATGTGGCACGCAGTTTCGGCAt < 1:4873422/35‑1 (MQ=255) aCGGAGATCGTTGATGTGGCACGCAGTTTCGGCAt < 1:1141928/35‑1 (MQ=255) aCGGAGATCGTTGATGTGGCACGCAGTTTCGGCAt < 1:2703324/35‑1 (MQ=255) aCGGAGATCGTTGATGTGGCACGCAGTTTCGGCAt < 1:3445443/35‑1 (MQ=255) cGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATCCGGCATTTACATTCTCGTTTGaa < 1:4622790/71‑1 (MQ=255) agaTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGc < 1:6310508/49‑1 (MQ=255) agaTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGc < 1:3863811/49‑1 (MQ=255) gaTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAt < 1:4822372/50‑1 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAg > 1:3456901/1‑38 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:381997/43‑1 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATg < 1:5397693/43‑1 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAt > 1:5155794/1‑49 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCAt > 1:3606862/1‑49 (MQ=255) aTCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAg < 1:6563257/71‑1 (MQ=255) cGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCaa > 1:5810399/1‑39 (MQ=255) cGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCg > 1:3694282/1‑43 (MQ=255) cGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAGt > 1:4943632/1‑70 (MQ=255) cGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAGt > 1:4339756/1‑70 (MQ=255) cGTTGATATGGCACGCAGTTTCGGCATTTTTTCCAGCaa > 1:7381301/1‑39 (MQ=255) gTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAGTaa < 1:788029/71‑1 (MQ=255) | TGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAAAATTGTCATAGCCGACGGAGATCGTTGATGTGGCACGCAGTTTCGGCATTTTTTCCAGCAATGCGGCATTTACATTCTCGTTTGAACCCAGTAA > W3110S.gb/3922825‑3922963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |