| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4115491 = | 111 (1.360) | 8 (0.100) | 3/92 | NT | 7.0% | coding (2057/2553 nt) | mrcA | fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase |
| ? | W3110S.gb | 4115511 = | 107 (1.400) | coding (2037/2553 nt) | mrcA | fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase | |||||
Only 100 of 144 total aligned reads displayed.
CTGCAAATCACGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTC > W3110S.gb/4115421‑4115559 | ggcaaatcaggcgttagtggcgaagactggcgcgcaggagtacgcaccgcacgtcatcaacactccgctgg > 1:2386520‑M1/71‑71 (MQ=255)cTGCAAATCACGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAg < 1:7664931/71‑1 (MQ=255) tGCAAATCACGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAg > 1:4443453/1‑70 (MQ=255) gcaaatcaggcgttagtggcgaagactggcgcgcaggagtacgcaccgcacgtcatcaacactccgctgg < 1:3712181‑M1/1‑1 (MQ=255) caaatcaggcgttagtggcgaagactggcgcgcaggagtacgcaccgcacgtcatcaacactccgctgGCa > 1:2838667‑M1/69‑71 (MQ=255) aaaTCACGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCAct > 1:1178566/1‑71 (MQ=255) aCGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTaa > 1:4644800/1‑71 (MQ=255) cGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAAt > 1:3903462/1‑71 (MQ=255) gACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTaa > 1:1649619/1‑69 (MQ=255) aCCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAAt > 1:581500/1‑69 (MQ=255) cTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAg > 1:7504375/1‑70 (MQ=255) cACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGa > 1:7531501/1‑69 (MQ=255) cGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCActct > 1:3208931/1‑58 (MQ=255) cGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGc < 1:7395256/71‑1 (MQ=255) gccagccaGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGaa < 1:2709540/67‑1 (MQ=255) cagccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGa < 1:4922595/64‑1 (MQ=255) cagccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAg > 1:2020973/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:5137154/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:5644423/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:944183/1‑71 (MQ=255) ccagTACCCTGCCAGCATGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:7389593/1‑70 (MQ=255) agTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAg > 1:7718222/1‑71 (MQ=255) gTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgt > 1:3009313/1‑71 (MQ=255) tACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgtg > 1:1168365/1‑71 (MQ=255) tACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgtg > 1:720202/1‑71 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:1821033/66‑1 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:2263125/66‑1 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGtt > 1:1065551/1‑71 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGtt < 1:623569/71‑1 (MQ=255) ccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCTGAGTGTtg < 1:3110559/71‑1 (MQ=255) ccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:2103105/71‑1 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:6172108/1‑71 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:121630/1‑71 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:3320103/1‑71 (MQ=255) tGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGa < 1:4847275/52‑1 (MQ=255) gCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGcc > 1:4380093/1‑56 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:6420454/70‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:5269560/70‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:215118/70‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgat < 1:1070018/69‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgat < 1:7185801/69‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgat < 1:167739/69‑1 (MQ=255) gagtacgcacggcacgtcatcaacactccgctgGCACTCTTAATCAGGAATGcc < 1:1377222‑M1/21‑1 (MQ=255) gagtacgcaccgcacgtcatcaacactccgctgGCACTCTTAATCAGGAATGcc < 1:5780935‑M1/21‑1 (MQ=255) gCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgt < 1:4343345/71‑1 (MQ=255) gCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgt > 1:5822825/1‑71 (MQ=255) ccTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtg < 1:6091604/71‑1 (MQ=255) tGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTa > 1:7163538/1‑37 (MQ=255) tGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTa > 1:6373200/1‑37 (MQ=255) tGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTa > 1:2947165/1‑37 (MQ=255) ggCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcgg > 1:1668493/1‑71 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggt < 1:530719/71‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggt < 1:5067276/71‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggt < 1:5700750/71‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:6974155/69‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:7230702/69‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:3427113/69‑1 (MQ=255) caccgcacgtcatcaacactccgctgGCACTCTTAATCAg > 1:6012908‑M1/27‑40 (MQ=255) caccgcacgtcatcaacactccgctgGCACTCTTAATCAg > 1:2371068‑M1/27‑40 (MQ=255) caccgcacgtcatcaacactccgctgGCACTCTTAATCAg > 1:3861701‑M1/27‑40 (MQ=255) tCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgtg < 1:6329697/54‑1 (MQ=255) cACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg > 1:1477291/1‑71 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga < 1:146162/59‑1 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga > 1:4774807/1‑59 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga > 1:4466225/1‑59 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga < 1:6878767/59‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:2051802/48‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:7366156/48‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:6755273/69‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTa > 1:362185/1‑71 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTa > 1:4123545/1‑71 (MQ=255) aaaGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:2497851/67‑1 (MQ=255) aaaGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:1237168/67‑1 (MQ=255) tatTGGTGTTCAAAGCACTCTTAATCAGGAATGCCa < 1:2351747/36‑1 (MQ=255) tatTGGTGTTCAAAGCACTCTTAATCAGGAATGCCa < 1:3152387/36‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:7876942/46‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:3134573/46‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTgcg > 1:4107775/1‑71 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGc > 1:7628570/1‑36 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGc > 1:2691893/1‑36 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgt < 1:3762644/41‑1 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgt < 1:2564167/41‑1 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTACTgcg < 1:570435/70‑1 (MQ=255) gtgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGa > 1:6645878/1‑36 (MQ=255) gtgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGa > 1:2629427/1‑36 (MQ=255) tgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCt < 1:639035/63‑1 (MQ=255) tgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCt < 1:309535/63‑1 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTcc > 1:1433396/1‑60 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCat > 1:3548915/1‑69 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGt > 1:5342035/1‑71 (MQ=255) tCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:2549625/53‑1 (MQ=255) tCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:1070486/53‑1 (MQ=255) tCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:6320184/53‑1 (MQ=255) cAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCt > 1:4884439/1‑71 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:724703/36‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcgg > 1:7844626/1‑47 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAg < 1:279745/67‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCtt < 1:5104195/71‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCtt < 1:6501811/71‑1 (MQ=255) aaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTc < 1:7352329/71‑1 (MQ=255) | CTGCAAATCACGACCTGCACGCCAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTC > W3110S.gb/4115421‑4115559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |