| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4115491 = | 111 (1.360) | 8 (0.100) | 3/92 | NT | 7.0% | coding (2057/2553 nt) | mrcA | fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase |
| ? | W3110S.gb | 4115511 = | 107 (1.400) | coding (2037/2553 nt) | mrcA | fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase | |||||
Only 100 of 154 total aligned reads displayed.
CAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGATTTGCC > W3110S.gb/4115443‑4115580 | cagccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAg > 1:2020973/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:944183/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:5644423/1‑71 (MQ=255) gccagTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:5137154/1‑71 (MQ=255) ccagTACCCTGCCAGCATGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCg > 1:7389593/1‑70 (MQ=255) agTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAg > 1:7718222/1‑71 (MQ=255) tACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgtg > 1:720202/1‑71 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:6293982/66‑1 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:2263125/66‑1 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:1821033/66‑1 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGtt > 1:1065551/1‑71 (MQ=255) cccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGtt < 1:5693456/71‑1 (MQ=255) ccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCTGAGTGTtg < 1:3110559/71‑1 (MQ=255) ccTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:2103105/71‑1 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:6172108/1‑71 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:121630/1‑71 (MQ=255) cTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtga > 1:3320103/1‑71 (MQ=255) gCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGcc > 1:4380093/1‑56 (MQ=255) gCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgat > 1:6698161/1‑70 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:5269560/70‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:6420454/70‑1 (MQ=255) ccAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgat < 1:7185801/69‑1 (MQ=255) gagtacgcacggcacgtcatcaacactccgctgGCACTCTTAATCAGGAATGcc < 1:1377222‑M1/21‑1 (MQ=255) gagtacgcaccgcacgtcatcaacactccgctgGCACTCTTAATCAGGAATGcc < 1:1750778‑M1/21‑1 (MQ=255) gagtacgcaccgcacgtcatcaacactccgctgGCACTCTTAATCAGGAATGcc < 1:5780935‑M1/21‑1 (MQ=255) gCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgt > 1:5822825/1‑71 (MQ=255) ccTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtg < 1:6091604/71‑1 (MQ=255) ggCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcgg > 1:1668493/1‑71 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggt < 1:530719/71‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:6974155/69‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:4856891/69‑1 (MQ=255) gCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcg < 1:3427113/69‑1 (MQ=255) cACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg > 1:1477291/1‑71 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga < 1:6878767/59‑1 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga > 1:4774807/1‑59 (MQ=255) aCCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatga < 1:4395891/59‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:7366156/48‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGa < 1:2051802/48‑1 (MQ=255) ccAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTa > 1:4123545/1‑71 (MQ=255) cAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTAc > 1:6336167/1‑71 (MQ=255) aaaGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACt > 1:4180374/1‑71 (MQ=255) tatTGGTGTTCAAAGCACTCTTAATCAGGAATGCCa < 1:2351747/36‑1 (MQ=255) tatTGGTGTTCAAAGCACTCTTAATCAGGAATGCCa < 1:3152387/36‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:3134573/46‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:7876942/46‑1 (MQ=255) atTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTgcg > 1:4107775/1‑71 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGc > 1:7628570/1‑36 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGc > 1:3193492/1‑36 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgt < 1:3762644/41‑1 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAgt < 1:2564167/41‑1 (MQ=255) ttGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTACTgcg < 1:570435/70‑1 (MQ=255) gtgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGa > 1:6645878/1‑36 (MQ=255) gtgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGa > 1:2629427/1‑36 (MQ=255) tgtTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCt < 1:309535/63‑1 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTcc > 1:1433396/1‑60 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCat > 1:3548915/1‑69 (MQ=255) ttCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGt > 1:5342035/1‑71 (MQ=255) tCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:1070486/53‑1 (MQ=255) tCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggtgcg < 1:6320184/53‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTtg < 1:724703/36‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAg < 1:279745/67‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCtt < 1:6501811/71‑1 (MQ=255) aaaGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCtt < 1:5104195/71‑1 (MQ=255) aaGCACTCTTAATCAGGAATGCCAGCGGAGTGTtgatg < 1:6435502/38‑1 (MQ=255) ggcattcctgattaagagtgcCAGCGGAGTGTTGATGACGTGCGGTGCGTACTc < 1:1750778‑M2/33‑1 (MQ=255) tcctgattaagagtgcCAGCGGAGTGTTGATGACgtgcgg < 1:1108218‑M2/24‑1 (MQ=255) ctTAATCAGGAATGCCAGCGGAGTGTTGATGACgtgcggt < 1:7641424/40‑1 (MQ=255) ctTAATCAGGAATGCCAGCGGAGTGTTGATGACgtccgg > 1:1028403/1‑39 (MQ=255) ttAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTg > 1:2190802/1‑50 (MQ=255) ttAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCATCGCCAc > 1:1291952/1‑68 (MQ=255) ctgattaagagtgcCAGCGGAGTGTTGATGACgtgcggtg > 1:2371068‑M2/15‑40 (MQ=255) ctgattaagagtgcCAGCGGAGTGTTGATGACgtgcggtg > 1:3861701‑M2/15‑40 (MQ=255) ctgattaagagtgcCAGCGGAGTGTTGATGACgtgcggtg > 1:7859249‑M2/15‑40 (MQ=255) tAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTgcgcgc < 1:4886154/54‑1 (MQ=255) aaTCAGGAATGCCAGCGGAGTGTTGATGACTTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACg > 1:2497895/1‑71 (MQ=255) aaTCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTAATCCTGCGCGCCAGTCTTCGCCACTAAc < 1:4320687/70‑1 (MQ=255) aTCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCa > 1:7210948/1‑54 (MQ=255) aTCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCa > 1:2244229/1‑54 (MQ=255) aTCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCa > 1:6889977/1‑54 (MQ=255) tCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGc < 1:6017859/61‑1 (MQ=255) cAGGAATGCCAGCGGAGTGTTGATGACgtgcggtg < 1:7506456/35‑1 (MQ=255) cAGGAATGCCAGCGGAGTGTTGATGACgtgcggtg < 1:1170424/35‑1 (MQ=255) cAGGAATGCCAGCGGAGTGTTGATGACgtgcggtg < 1:5964825/35‑1 (MQ=255) cAGGAATGCCAGCGGAGTGTTGATGACgtgcggtg < 1:2554142/35‑1 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACt > 1:2598209/1‑40 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACt > 1:2825936/1‑40 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTgcg > 1:6482469/1‑46 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGc < 1:3702497/59‑1 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCt > 1:2930960/1‑70 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCt < 1:434295/70‑1 (MQ=255) aGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCt < 1:4891982/70‑1 (MQ=255) ggAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCt < 1:370002/42‑1 (MQ=255) ggAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCt < 1:1388337/42‑1 (MQ=255) gAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGAt < 1:7699875/71‑1 (MQ=255) aaTGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGAtt < 1:6147207/71‑1 (MQ=255) aTGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGAttt < 1:1562656/71‑1 (MQ=255) aTGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGAttt < 1:3326450/71‑1 (MQ=255) tgcCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGATTTg > 1:2838667‑M2/4‑71 (MQ=255) cCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGATTTGcc > 1:2386520‑M2/2‑71 (MQ=255) cAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTc < 1:7401348/46‑1 (MQ=255) | CAGCCAGTACCCTGCCAGCCTGGCTCACCAAAGATATTGGTGTTCAAAGCACTCTTAATCAGGAATGCCAGCGGAGTGTTGATGACGTGCGGTGCGTACTCCTGCGCGCCAGTCTTCGCCACTAACGCCTGATTTGCC > W3110S.gb/4115443‑4115580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |