| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4396236 | 116 (1.420) | 8 (0.110) | 5/90 | NT | 6.2% | intergenic (‑45/‑50) | rsgA/orn | ribosome small subunit‑dependent GTPase A/oligoribonuclease |
| ? | W3110S.gb | = 4396250 | 136 (1.820) | intergenic (‑59/‑36) | rsgA/orn | ribosome small subunit‑dependent GTPase A/oligoribonuclease | |||||
Only 100 of 183 total aligned reads displayed.
TTGGAGAGTTTATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAAC > W3110S.gb/4396169‑4396306 | tGGAGAGTTTATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATac < 1:2811219/69‑1 (MQ=255) gagTTTATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCaa > 1:5273814/1‑71 (MQ=255) gTTTATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAAtt < 1:1767354/71‑1 (MQ=255) tttATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATtg < 1:6527180/71‑1 (MQ=255) aTTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATAGACGCAATtgtg > 1:4782256/1‑70 (MQ=255) aTTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATtgtg > 1:4719980/1‑70 (MQ=255) aTTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATtgtg > 1:431345/1‑70 (MQ=255) tttttACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGa < 1:4742913‑M2/71‑2 (MQ=255) tttttACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAAATGTGGa < 1:7841788‑M2/71‑2 (MQ=255) tttACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGat < 1:1596358‑M2/70‑3 (MQ=255) tACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATccacaattgcgtgtatca < 1:3243078‑M1/70‑19 (MQ=255) tACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:3925324‑M2/1‑66 (MQ=255) cTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATccacaattgcgtgtatcatag < 1:4587472‑M1/71‑22 (MQ=255) cTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATccacaattgcgtgtatcat < 1:168937‑M1/69‑20 (MQ=255) aaTCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATtg < 1:2119586/58‑1 (MQ=255) aaTCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAg > 1:815008/1‑71 (MQ=255) aTCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGt < 1:470046/71‑1 (MQ=255) cGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCa > 1:4457065/1‑71 (MQ=255) tACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATtgt < 1:7041900/54‑1 (MQ=255) gACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:742315/71‑1 (MQ=255) gACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:1955596/71‑1 (MQ=255) tCCTGGTCGCCCCTGATGGGCAAAACATCTATGATa > 1:7412689/1‑36 (MQ=255) tCCTGGTCGCCCCTGATGGGCAAAACATCTATGATa > 1:6096975/1‑36 (MQ=255) tCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCa > 1:3326912/1‑42 (MQ=255) cTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:1736711/1‑71 (MQ=255) cTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:156742/1‑71 (MQ=255) gTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:4667355/67‑1 (MQ=255) gTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:5151140/67‑1 (MQ=255) cGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg > 1:6681084/1‑69 (MQ=255) gCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaa < 1:3338018/70‑1 (MQ=255) gCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaa > 1:3859230/1‑70 (MQ=255) ccccTGATGGGCAAAACATCTATGATccacaattgcgtgtatc < 1:5374727‑M1/43‑18 (MQ=255) ccccTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:1133022/1‑71 (MQ=255) ccccTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:4832454/1‑71 (MQ=255) cccTGATGGGCAAAACATCTATGATccacaattgcgtgtatc < 1:4329065‑M1/42‑18 (MQ=255) ccTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATa < 1:6821821/71‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAatat < 1:6631959/45‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAatat < 1:7575231/45‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCa < 1:6600545/50‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAg > 1:7642192/1‑71 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAg < 1:7830589/71‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTgg < 1:1453193/36‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:654199‑M2/1‑36 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:1990722‑M2/1‑36 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:6813280‑M2/1‑36 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAat < 1:6337107/42‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAat < 1:7762540/42‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAat < 1:2582270/42‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGa < 1:1410779/64‑1 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAg > 1:4704025/1‑45 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:6757966/54‑1 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAAt < 1:6800096/56‑1 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAAt < 1:7133220/56‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACtgtg < 1:2980780/52‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACt < 1:3816482/49‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACt < 1:137397/49‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACt < 1:3041598/49‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:1232329/1‑65 (MQ=255) tGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACtg < 1:7236729/49‑1 (MQ=255) tGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGt > 1:861019/1‑58 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGc < 1:6012092/66‑1 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGa < 1:7076038/70‑1 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAg < 1:7303240/71‑1 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATGAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGt > 1:4056523/1‑71 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:5052538/1‑37 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:83714/1‑37 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:266817/1‑37 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:6220231/1‑37 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:3673820/49‑1 (MQ=255) aaaaCATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:5305057/51‑1 (MQ=255) aaaaCATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGc > 1:2302187/1‑71 (MQ=255) aaaCATCTATGATACACGCAATTGTGGATCAATATAGt < 1:1644202/38‑1 (MQ=255) aTCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaa < 1:6633241/52‑1 (MQ=255) tCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg < 1:440018/49‑1 (MQ=255) tCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg < 1:2706336/49‑1 (MQ=255) tCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg < 1:4436460/49‑1 (MQ=255) tATGATACACGCAATTGTGGatcatagatgttttgcccatcagg > 1:4152576‑M2/1‑20 (MQ=255) tATGATACACGCAATTGTGGatcatagatgttttgcccatcagg > 1:3725276‑M2/1‑20 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:6461193/1‑70 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:3262550/1‑70 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:1317415/1‑70 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa > 1:2234854/1‑69 (MQ=255) tGATccacaattgcgtgtatcatagatgttttgcccatcaggggcgaccaggagtctgtacgattgagta > 1:3925324‑M1/1‑4 (MQ=255) tGATccacaattgcgtgtatcatagatgttttgcccatcaggg > 1:5206447‑M1/1‑4 (MQ=255) tGATccacaattgcgtgtatcatagatgttttgcccatca > 1:1036239‑M1/1‑4 (MQ=255) tGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa < 1:7391210/67‑1 (MQ=255) gATccacaattgcgtgtatcatagatgttttgcccatcaggggcgaccaggagtctgtacgattgagta > 1:1299885‑M1/1‑3 (MQ=255) gATACACGCAATTGTGGatcatagatgttttgcccatcagggg < 1:7490633‑M2/43‑27 (MQ=255) gATACACGCAATTGTGGatcatagatgttttgcccatcagggg < 1:5374727‑M2/43‑27 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGt > 1:1336926/1‑42 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaaa < 1:5901550/68‑1 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaac > 1:1510137/1‑70 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaac > 1:1030852/1‑70 (MQ=255) aTccacaattgcgtgtatcatagatgttttgcccatcaggggcgaccaggagtctgtacgattgagtaaa < 1:2832281‑M1/70‑69 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:5772923/1‑40 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:4972927/1‑40 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaa > 1:2570646/1‑71 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaa < 1:1539965/71‑1 (MQ=255) tACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaac > 1:1911161/1‑71 (MQ=255) tACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaac > 1:1807627/1‑71 (MQ=255) | TTGGAGAGTTTATTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAAC > W3110S.gb/4396169‑4396306 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |