| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4396236 | 116 (1.420) | 8 (0.110) | 5/90 | NT | 6.2% | intergenic (‑45/‑50) | rsgA/orn | ribosome small subunit‑dependent GTPase A/oligoribonuclease |
| ? | W3110S.gb | = 4396250 | 136 (1.820) | intergenic (‑59/‑36) | rsgA/orn | ribosome small subunit‑dependent GTPase A/oligoribonuclease | |||||
Only 100 of 195 total aligned reads displayed.
TTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGGATCGA > W3110S.gb/4396181‑4396320 | tttttACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAAATGTGGa < 1:7841788‑M2/71‑2 (MQ=255) tttACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGat < 1:1596358‑M2/70‑3 (MQ=255) tACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:3925324‑M2/1‑66 (MQ=255) tACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGatc > 1:1299885‑M2/1‑66 (MQ=255) aTCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGt < 1:470046/71‑1 (MQ=255) tCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTc < 1:6217759/71‑1 (MQ=255) cGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCa > 1:4457065/1‑71 (MQ=255) cAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACtgt > 1:1741999/1‑71 (MQ=255) aGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACtgt > 1:1395474/1‑70 (MQ=255) gACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:742315/71‑1 (MQ=255) gACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGa < 1:3801180/71‑1 (MQ=255) cTGGTCGCCCCTTATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:4713328/1‑71 (MQ=255) gTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:4667355/67‑1 (MQ=255) gTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:5151140/67‑1 (MQ=255) cGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg > 1:6681084/1‑69 (MQ=255) gCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaa > 1:3859230/1‑70 (MQ=255) ccccTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:1133022/1‑71 (MQ=255) ccccTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:4832454/1‑71 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAatat < 1:7575231/45‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAatat < 1:6631959/45‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCa < 1:6600545/50‑1 (MQ=255) cTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAg > 1:7642192/1‑71 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:1036239‑M2/1‑36 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGatca > 1:6813280‑M2/1‑36 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAat < 1:6337107/42‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAat < 1:2582270/42‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGa < 1:527645/64‑1 (MQ=255) tGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAg > 1:2674901/1‑70 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAAtata > 1:6652181/1‑44 (MQ=255) gATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAAt < 1:7133220/56‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACt < 1:3041598/49‑1 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:1232329/1‑65 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGaaaa > 1:6505782/1‑65 (MQ=255) aTGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGc < 1:3382237/69‑1 (MQ=255) tGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACtg < 1:7236729/49‑1 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGc < 1:6012092/66‑1 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGa < 1:7076038/70‑1 (MQ=255) ggCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAg < 1:7303240/71‑1 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATGAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGt > 1:4056523/1‑71 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:5052538/1‑37 (MQ=255) gCAAAACATCTATGATACACGCAATTGTGGATCAata > 1:904470/1‑37 (MQ=255) aaaaCATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATgg < 1:5305057/51‑1 (MQ=255) aaaaCATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATa > 1:1946208/1‑61 (MQ=255) aaaCATCTATGATACACGCAATTGTGGATCAATATAGt < 1:1644202/38‑1 (MQ=255) aaaCATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg < 1:844973/54‑1 (MQ=255) aaaCATCTATGATACACGCAATTGTGGATCAAAATAGTCACTGTGAATGGGt > 1:1822394/1‑52 (MQ=255) aTCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAAt < 1:144140/44‑1 (MQ=255) tCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTgg < 1:4436460/49‑1 (MQ=255) cTATGATACACGCAATTGTGGatcatagatgttttgcccatcaggggcgaccaggagtctgtacgattgag < 1:4587472‑M2/71‑51 (MQ=255) cTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa > 1:836684/1‑70 (MQ=255) tATGATACACGCAATTGTGGatcatagatgttttgcccatcagg > 1:3725276‑M2/1‑20 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACtg > 1:4199960/1‑36 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:4316430/1‑70 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:3262550/1‑70 (MQ=255) tATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa > 1:2234854/1‑69 (MQ=255) aTGATACACGCAATTGTGGatcatagatgttttgcccatcaggggcgaccaggagtctgtacgattgag < 1:168937‑M2/69‑51 (MQ=255) aTGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGTGTGGAAAATAGCATGAGTGCCAATg < 1:6771430/67‑1 (MQ=255) aTGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATg < 1:2736732/67‑1 (MQ=255) aTGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATg < 1:235312/67‑1 (MQ=255) tGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa < 1:1996666/68‑1 (MQ=255) tGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa < 1:7391210/67‑1 (MQ=255) tGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGa < 1:564286/67‑1 (MQ=255) gATACACGCAATTGTGGatcatagatgttttgcccatcagggg < 1:7490633‑M2/43‑27 (MQ=255) gATACACGCAATTGTGGatcatagatgttttgcccatcaggg < 1:4329065‑M2/42‑26 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGt > 1:4755151/1‑42 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGt > 1:1336926/1‑42 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaaa < 1:6817718/68‑1 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaaa < 1:5901550/68‑1 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaac > 1:1510137/1‑70 (MQ=255) gATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaac > 1:1030852/1‑70 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:4972927/1‑40 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:6570791/1‑40 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATggg > 1:5114927/1‑40 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaa < 1:1539965/71‑1 (MQ=255) aTACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaacaa > 1:2570646/1‑71 (MQ=255) acatGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGa < 1:7932635/53‑1 (MQ=255) acacGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGa < 1:1994546/53‑1 (MQ=255) cacGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCt < 1:1986392/71‑1 (MQ=255) cacGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCt > 1:2887522/1‑71 (MQ=255) acGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCt > 1:232107/1‑70 (MQ=255) cGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGTAAATAGCATGa < 1:1372740/50‑1 (MQ=255) cGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGa < 1:3208577/71‑1 (MQ=255) cAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGAtt > 1:5778139/1‑71 (MQ=255) cAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGAtt > 1:7002427/1‑71 (MQ=255) aTTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTg > 1:4097775/1‑71 (MQ=255) ttGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATg < 1:3831193/54‑1 (MQ=255) ttGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATg < 1:1468709/54‑1 (MQ=255) ttGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAaac > 1:293910/1‑59 (MQ=255) ttGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTgg < 1:3031713/71‑1 (MQ=255) tgtgGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCa > 1:6426511/1‑41 (MQ=255) tgtgGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGa > 1:7777386/1‑44 (MQ=255) tgtgGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGc > 1:7690837/1‑48 (MQ=255) gtgGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGaa > 1:5514123/1‑54 (MQ=255) gtgGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTgg < 1:5442747/69‑1 (MQ=255) tgGATCAATATAGTCACTGTGAATGGGTGGAAAATATCATGa > 1:2078246/1‑42 (MQ=255) ggATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGgatc > 1:6733822/1‑70 (MQ=255) gATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGgatcga < 1:7921692/71‑1 (MQ=255) gATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGgatcg < 1:3558428/70‑1 (MQ=255) gATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGgatcg < 1:6248985/70‑1 (MQ=255) gATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGgatcg < 1:3866277/70‑1 (MQ=255) | TTTTTACTCAATCGTACAGACTCCTGGTCGCCCCTGATGGGCAAAACATCTATGATACACGCAATTGTGGATCAATATAGTCACTGTGAATGGGTGGAAAATAGCATGAGTGCCAATGAAAACAACCTGATTTGGATCGA > W3110S.gb/4396181‑4396320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |