| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 344428 | 75 (0.920) | 7 (0.090) | 4/96 | NT | 8.0% | intergenic (+213/‑200) | yahL/yahM | hypothetical protein/hypothetical protein |
| ? | W3110S.gb | = 344452 | 87 (1.090) | intergenic (+237/‑176) | yahL/yahM | hypothetical protein/hypothetical protein | |||||
Only 100 of 112 total aligned reads displayed.
TTTCGCAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTCAAGC > W3110S.gb/344382‑344521 | tttCGCAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCat < 1:6360538/71‑1 (MQ=255)tttCGCAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCat < 1:1891208/71‑1 (MQ=255) tCGCAGCCATGCGGTGTATAAAAAATGATCTCATGTAGATGTTTTGTGAATGTGTTGGTTGACATTCATa > 1:1852893‑M2/1‑69 (MQ=255) cGCAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCatat < 1:5848751/70‑1 (MQ=255) cAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATTTGTTGGTTGACATTCATa < 1:6919183‑M2/67‑2 (MQ=255) cAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaa < 1:3847501/71‑1 (MQ=255) aGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaa > 1:6472351/1‑70 (MQ=255) gCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaaa > 1:2765418/1‑70 (MQ=255) cATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaaaaa > 1:3832939/1‑70 (MQ=255) aTGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaaaaaaa < 1:1398932/71‑1 (MQ=255) gCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaaaaaaa > 1:2650962/1‑69 (MQ=255) gCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAAt > 1:4924622/1‑70 (MQ=255) cGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATc < 1:7048372/70‑1 (MQ=255) tgtgtaTAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATa > 1:1970170‑M2/2‑57 (MQ=255) gtgtATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCAt < 1:6605214/70‑1 (MQ=255) gtgtATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATa < 1:7162306/71‑1 (MQ=255) tgtATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATaa < 1:3194025/71‑1 (MQ=255) gtATAAAAAATGTTCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAAt > 1:6290672/1‑71 (MQ=255) tataAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGaaaa < 1:1311213/60‑1 (MQ=255) aaaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATa > 1:144687/1‑64 (MQ=255) ataaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATaa < 1:3488639/62‑1 (MQ=255) aaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAAt < 1:6043915/59‑1 (MQ=255) aaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCcatca > 1:3775332/1‑71 (MQ=255) aaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCcatca > 1:2849150/1‑71 (MQ=255) aaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCatat > 1:190519/1‑48 (MQ=255) aaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCcatcat < 1:635756/71‑1 (MQ=255) aTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATg > 1:6136561/1‑71 (MQ=255) tGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGt > 1:6778366/1‑71 (MQ=255) gATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGtt > 1:445976/1‑71 (MQ=255) tcATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGttt < 1:1290527/68‑1 (MQ=255) tcATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtg > 1:883490/1‑69 (MQ=255) aTGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtgtg < 1:3236485/71‑1 (MQ=255) aTGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtg < 1:582909/69‑1 (MQ=255) aTGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtg < 1:649037/69‑1 (MQ=255) cAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTggg < 1:29598/70‑1 (MQ=255) aGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtg > 1:4567700/1‑65 (MQ=255) aTGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAAt < 1:6967797/42‑1 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTc > 1:2253020/1‑48 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTgg > 1:5527678/1‑64 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTgg > 1:7173899/1‑64 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTgg > 1:6666483/1‑64 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATGATAATTCCATCATGttt < 1:1210840/57‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtgtg < 1:2284719/62‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtgtg < 1:2690300/62‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtttt < 1:2887596/71‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtttt < 1:6725437/71‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtttt < 1:4510211/71‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtttt < 1:1996727/71‑1 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtttt < 1:4741496/71‑1 (MQ=255) tttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATaa > 1:3518073/1‑43 (MQ=255) tttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTc > 1:2329101/1‑71 (MQ=255) tttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTc > 1:201015/1‑71 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATaaaacatctgcatgagatcattttttatacaccgcatggct < 1:2018366‑M2/67‑42 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATc > 1:1123580/1‑38 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATc > 1:2725545/1‑38 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATc > 1:6219237/1‑38 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGtt < 1:4541436/54‑1 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGtt < 1:6108141/54‑1 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGtt < 1:1450900/54‑1 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTc < 1:2270241/70‑1 (MQ=255) ttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTc < 1:691231/70‑1 (MQ=255) ttGTGAATGTGTTGGATGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTc < 1:3094603/70‑1 (MQ=255) gtgAATGTGTTGGTTGACATTCATaaaacatctgcatgag > 1:1872238‑M2/1‑24 (MQ=255) gtgAATGTGTTGGTTGACATTCATaaaacatctgcatgag > 1:4548155‑M2/1‑24 (MQ=255) gtgAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtg > 1:6301436/1‑54 (MQ=255) gAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtgt < 1:1080612/55‑1 (MQ=255) gAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTtgt < 1:208799/53‑1 (MQ=255) aaTGTGTTGGTTGACATTCATaaaacatctgcatgagatcattt > 1:3524700‑M2/1‑21 (MQ=255) aaTGTGTTGGTTGACATTCATaaaacatctgcatgagatcattt > 1:5123349‑M2/1‑21 (MQ=255) aTGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCtt > 1:4944482/1‑61 (MQ=255) aTGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTg > 1:3428206/1‑66 (MQ=255) aTGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTaagt > 1:561670/1‑68 (MQ=255) aTGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCt < 1:1888505/71‑1 (MQ=255) aTGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCt < 1:3828311/71‑1 (MQ=255) tgtgTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGtt < 1:4107975/47‑1 (MQ=255) tgtgTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCt > 1:3170452/1‑70 (MQ=255) gtgtTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTa > 1:7186045/1‑71 (MQ=255) gttggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGt < 1:2656498/63‑1 (MQ=255) gttggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGt < 1:6702408/63‑1 (MQ=255) ttggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACg < 1:1856778/70‑1 (MQ=255) ggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCa > 1:550670/1‑70 (MQ=255) ggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCa < 1:3198564/70‑1 (MQ=255) ggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCa < 1:1361227/70‑1 (MQ=255) gttgACATTCATATGAAAAAAATCATAATTCCATCATGTTtgt < 1:558062/43‑1 (MQ=255) gttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATc < 1:5696807/71‑1 (MQ=255) ttgACATTCATATGAAAAAAATCATAATTCCATCATGTTtgt < 1:7911601/42‑1 (MQ=255) ttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTAt < 1:5856678/60‑1 (MQ=255) ttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCg < 1:465109/71‑1 (MQ=255) ttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCg > 1:4754174/1‑71 (MQ=255) tgACATTCATATGAAAAAAATCATAATTCCATCATGTTtgtgt > 1:289150/1‑43 (MQ=255) tgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCg > 1:2670391/1‑70 (MQ=255) gACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGc < 1:4597249/70‑1 (MQ=255) gACATACATATGAAAAAAATCATAATTCAATCATGTTTGTGTggg > 1:7528362/1‑45 (MQ=38) aCATTCATaaaacatctgcatgagatcattttttatacaccgcatggctgcgaaaccactactggtgctt > 1:700616‑M2/1‑8 (MQ=255) aTTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTc < 1:3159328/71‑1 (MQ=255) tCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTc < 1:5881163/69‑1 (MQ=255) tCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTc < 1:7829281/69‑1 (MQ=255) tCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGGCTTTTCTGTATCTTACGCATCGCACTc < 1:6902194/69‑1 (MQ=255) tatGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGt < 1:5008927/48‑1 (MQ=255) tatGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTCAAGc > 1:1898837/1‑70 (MQ=255) | TTTCGCAGCCATGCGGTGTATAAAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTCTGTATCTTACGCATCGCACTCAAGC > W3110S.gb/344382‑344521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |