| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2506069 = | 88 (1.080) | 5 (0.070) | 3/88 | NT | 6.6% | coding (241/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA |
| ? | W3110S.gb | 2506092 = | 63 (0.860) | coding (264/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA | |||||
Only 100 of 109 total aligned reads displayed.
CAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGATG > W3110S.gb/2506024‑2506161 | cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:5168744/71‑1 (MQ=255)cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:4928535/71‑1 (MQ=255)cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTCTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:2213229/71‑1 (MQ=255) aaaaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:2957772/1‑69 (MQ=255) aaaaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGaa < 1:1504619/71‑1 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc < 1:5376184/71‑1 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc > 1:4328036/1‑71 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc > 1:7664453/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:5897436/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:1254625/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:7029438/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:3257036/1‑71 (MQ=255) aTCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGtt < 1:906977/71‑1 (MQ=255) aGCGAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:7191817/1‑67 (MQ=255) cAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACt > 1:4629526/1‑71 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:6682020/1‑57 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:2548150/1‑57 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:600727/1‑57 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTg < 1:7118284/71‑1 (MQ=255) gTTCGCCCATAAACCGATTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTgg < 1:443695/71‑1 (MQ=255) cGCCCAT‑AACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAg > 1:2705441/1‑69 (MQ=255) gCCCATAAACCGTTTATTGTGTTCATAACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAgg < 1:5452159/70‑1 (MQ=255) cccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCg < 1:3713005/71‑1 (MQ=255) ccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGa < 1:4011413/60‑1 (MQ=255) ccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGt < 1:6092990/71‑1 (MQ=255) aaacgcctccagttcaaacgcttctACCGCGTGGAAAGAACATGCGGTa < 1:1892366‑M1/24‑1 (MQ=255) aaacgcctccagttcaaacgcttctACCGCGTGGAAAGAACATGCGGTa < 1:3616470‑M1/24‑1 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa < 1:1452115/65‑1 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGtt > 1:3812886/1‑71 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGtt > 1:3460765/1‑71 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:6553108/1‑47 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAAc > 1:5243713/1‑60 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa > 1:4651890/1‑64 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGttt > 1:2167259/1‑71 (MQ=255) aCCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc < 1:5915516/48‑1 (MQ=255) aCCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACt < 1:2198674/71‑1 (MQ=255) cGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa < 1:1809009/53‑1 (MQ=255) cGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa < 1:720233/53‑1 (MQ=255) tttATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:6815170/1‑46 (MQ=255) tttATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:208394/1‑46 (MQ=255) ttATTGTGTTCATCACTGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACAt > 1:473891/1‑70 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:7485303/1‑37 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:772925/1‑37 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTg < 1:1522934/47‑1 (MQ=255) aTTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATtct > 1:4885083/1‑71 (MQ=255) tgtTCATCACCGGGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCaa < 1:6818941/70‑1 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGATCTGGAGGCGTTTGCCt > 1:1804713/1‑60 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCaaa > 1:1285802/1‑71 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTAAATTCTCaaa > 1:520972/1‑71 (MQ=255) ttCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAAcc > 1:3762949/1‑71 (MQ=255) ttCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAAcc > 1:2244220/1‑71 (MQ=255) catcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCg > 1:3108242/1‑70 (MQ=255) atcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGt < 1:7115344/70‑1 (MQ=255) atcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTa < 1:1695821/71‑1 (MQ=255) tcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTg < 1:359103/36‑1 (MQ=255) tcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTAt < 1:80289/71‑1 (MQ=255) taccgcatgttctttccacgcggtAGAAGCGTTTGAACTGGAGGCGttt < 1:3616470‑M2/25‑1 (MQ=255) taccgcatgttctttccacgcggtAGAAGCGTTTGAACTGGAGGCGttt < 1:1892366‑M2/25‑1 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa > 1:4677806/1‑37 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa > 1:7264380/1‑37 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGAGTTTGaa > 1:7103187/1‑37 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTAc < 1:3643553‑M1/54‑1 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATc > 1:2001347‑M1/1‑70 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCa > 1:813057‑M1/1‑71 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCa > 1:53026‑M1/1‑71 (MQ=255) ccgcatgttctttccacgcggtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAg > 1:4169938‑M2/23‑71 (MQ=255) CCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAg > 1:3464293‑M1/1‑71 (MQ=255) CCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAg > 1:2710396‑M1/1‑71 (MQ=255) CCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAg < 1:7444917‑M1/71‑1 (MQ=255) CGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAg < 1:7067845‑M1/70‑1 (MQ=255) CGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTgg < 1:4335997‑M1/36‑1 (MQ=255) CGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa < 1:4323600‑M1/37‑1 (MQ=255) CGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa < 1:3212185‑M1/37‑1 (MQ=255) tGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa < 1:1432621/35‑1 (MQ=255) gttctttccacgcggtAGAAGCGTTTGAACTGGAGGCg < 1:267110‑M2/22‑1 (MQ=255) gAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCAc > 1:4982066/1‑71 (MQ=255) gAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCAc > 1:2496017/1‑71 (MQ=255) gAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCAc > 1:3588113/1‑71 (MQ=255) aagaagATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGt < 1:1061726/71‑1 (MQ=255) aaGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGt < 1:5542819/71‑1 (MQ=255) aaGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGt < 1:4404179/71‑1 (MQ=255) aGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACt < 1:5956335/41‑1 (MQ=255) aGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCa < 1:2828787/50‑1 (MQ=255) aGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGt > 1:602208/1‑56 (MQ=255) gAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTAt > 1:5726723/1‑71 (MQ=255) aaCATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCaaa > 1:2673659/1‑50 (MQ=255) aaCATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCaa > 1:1373122/1‑49 (MQ=255) aaCATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTAt > 1:1045417/1‑70 (MQ=255) tGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCg < 1:7336668/71‑1 (MQ=255) gcggtAGAAGCGTTTGAACTGGAGGCGTTTGACTACAt > 1:3088154‑M2/6‑38 (MQ=255) gcggtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCgg > 1:890703‑M2/6‑71 (MQ=255) cggtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCggg < 1:4013213‑M2/67‑1 (MQ=255) ggtAGAAGCGTTTGAGCTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGa < 1:7623677‑M2/68‑1 (MQ=255) ggtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGa > 1:5866505‑M2/4‑71 (MQ=255) gtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGAt < 1:3364685‑M2/69‑1 (MQ=255) gtAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGAt < 1:3830448‑M2/69‑1 (MQ=255) tAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGATg < 1:445781‑M2/70‑1 (MQ=255) aGAAGCGTTTGAACTGGAGGCGTTTGACTACATtctc > 1:2227923/1‑37 (MQ=255) aGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCAc > 1:3587363/1‑56 (MQ=255) aGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCAc > 1:378657/1‑56 (MQ=255) | CAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGATG > W3110S.gb/2506024‑2506161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |