| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4057522 = | 108 (1.330) | 7 (0.100) | 5/86 | NT | 8.1% | coding (1033/1179 nt) | yhhZ | conserved hypothetical protein |
| ? | W3110S.gb | 4057548 = | 65 (0.910) | coding (1007/1179 nt) | yhhZ | conserved hypothetical protein | |||||
Only 100 of 142 total aligned reads displayed.
TATTCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > W3110S.gb/4057478‑4057617 | tATTCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt > 1:4959290/1‑71 (MQ=255) aTTCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt > 1:3875247/1‑70 (MQ=255) aTTCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt > 1:2970116/1‑70 (MQ=255) ttCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt < 1:6701344/69‑1 (MQ=255) ttCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt < 1:2506264/69‑1 (MQ=255) ttCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATc < 1:3997355/70‑1 (MQ=255) tgttcaccataaactatctctagatgatggtggtactaatgtTTTCGATTAATACTAAATTTTCGAAATCa > 1:3453082‑M1/43‑71 (MQ=255) cGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAt < 1:1554002/70‑1 (MQ=255) cGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAt < 1:2856611/70‑1 (MQ=255) cGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAt < 1:1448984/70‑1 (MQ=255) gTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAtt < 1:1955361/70‑1 (MQ=255) gTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAtt < 1:5741675/70‑1 (MQ=255) gTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAtt < 1:2210378/70‑1 (MQ=255) tGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAg > 1:5784475/1‑71 (MQ=255) aTTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATc < 1:4466554/64‑1 (MQ=255) aTTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATc < 1:7899116/64‑1 (MQ=255) ttGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTac > 1:3341099/1‑71 (MQ=255) gTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAtt > 1:5837377/1‑60 (MQ=255) ttAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAtt < 1:4264035/59‑1 (MQ=255) ttAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatc < 1:4449948/71‑1 (MQ=255) ttAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatc < 1:3705829/71‑1 (MQ=255) aGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAg > 1:6500051/1‑59 (MQ=255) aGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatca < 1:3478240/70‑1 (MQ=255) aGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatca < 1:6542273/70‑1 (MQ=255) gTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc < 1:6154087/71‑1 (MQ=255) gTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc > 1:7320457/1‑71 (MQ=255) gTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc > 1:3400783/1‑71 (MQ=255) aaaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCAt > 1:3846130/1‑52 (MQ=255) aaaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc > 1:5195633/1‑68 (MQ=255) aaaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc > 1:1214192/1‑68 (MQ=255) aaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTa > 1:6046750/1‑69 (MQ=255) aaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTa > 1:7383388/1‑69 (MQ=255) aaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTa > 1:2277719/1‑69 (MQ=255) aaaCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTa > 1:6038021/1‑69 (MQ=255) aCTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTa > 1:7580478/1‑67 (MQ=255) cTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTac < 1:2447344/54‑1 (MQ=255) ttATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAAt < 1:101944/43‑1 (MQ=255) tATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAgaga > 1:4192598/1‑67 (MQ=255) atatGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTa < 1:881331/70‑1 (MQ=255) tatGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatca < 1:3810221/54‑1 (MQ=255) tatGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACcatca < 1:6867718/54‑1 (MQ=255) tatGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATg < 1:5778428/71‑1 (MQ=255) atGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTaccac > 1:2411160/1‑48 (MQ=255) atGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAgaga < 1:5676215/61‑1 (MQ=255) tGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGt > 1:4640191/1‑71 (MQ=255) ggTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGt < 1:6490205/63‑1 (MQ=255) gTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTg < 1:7911973/70‑1 (MQ=255) ttCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTacca < 1:718290/43‑1 (MQ=255) ttCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGaa > 1:3991501/1‑71 (MQ=255) ttCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGaa < 1:861627/71‑1 (MQ=255) aatgatttcgaaaatttagtattaatcgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATgg > 1:3296098‑M2/32‑67 (MQ=255) tCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATg > 1:3037025/1‑65 (MQ=255) tgatttcgaaaatttagtattaatcgaaaACATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACa > 1:3453082‑M2/30‑71 (MQ=255) cGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCatcatc < 1:4582437/49‑1 (MQ=255) gTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACAt < 1:6497646/71‑1 (MQ=255) ttttCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGa < 1:6778337/66‑1 (MQ=255) tttcgaaaatttagtattaatcgaaaTCATTAGTacca > 1:7099335‑M2/27‑38 (MQ=255) tttcgaaaatttagtattaatcgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATta > 1:4502346‑M2/27‑71 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTaccacc < 1:6075300‑M1/39‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTaccacc < 1:258908‑M1/39‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGAt < 1:6893970‑M1/52‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGt < 1:6411219‑M1/62‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGaa < 1:273602‑M1/65‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATta < 1:6406751‑M1/70‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATta < 1:6211885‑M1/70‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATta < 1:7059826‑M1/70‑1 (MQ=255) TTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATta < 1:2619857‑M1/70‑1 (MQ=255) TCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGATATAGTTTATGGTGa < 1:78091‑M1/63‑1 (MQ=255) TCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATtat > 1:6195886‑M1/1‑70 (MQ=255) tAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAAtt > 1:4090255/1‑69 (MQ=255) aaTACTAAATTTTCGAAATCATTAGTACCACCATCATCTagag > 1:1962225/1‑43 (MQ=255) aaTACTAAATTTTCGAAATCATTAGTACCACCATCATCTaga > 1:3716746/1‑42 (MQ=255) aaTACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAAtt > 1:4138868/1‑68 (MQ=255) aaTACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTa < 1:6982737/70‑1 (MQ=255) cTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGa < 1:1325087/71‑1 (MQ=255) cTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGa < 1:7778032/71‑1 (MQ=255) tAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGtt < 1:3073973/44‑1 (MQ=255) aaaTTTTCGAAATCATTAGTACCACCATCATCTAGAGATAg > 1:2647329/1‑41 (MQ=255) aaaTTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTaga > 1:1922628/1‑66 (MQ=255) aaaTTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGaa > 1:1348512/1‑70 (MQ=255) aaTTTTCGAAATCATTAGTACCACCATCATCTaga < 1:2170224/35‑1 (MQ=255) aaTTTTCGAAATCATTAGTACCACCATCATCTaga < 1:2052984/35‑1 (MQ=255) tttCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGaa > 1:1198480/1‑48 (MQ=255) tttCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGaa > 1:7512572/1‑48 (MQ=255) ttCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTa > 1:7741371/1‑59 (MQ=255) ttCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTa > 1:2239504/1‑59 (MQ=255) cgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGaa < 1:2181241‑M2/58‑1 (MQ=255) cgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGccc > 1:3345953‑M2/6‑71 (MQ=255) gaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTa < 1:1500991‑M2/52‑1 (MQ=255) aaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCttt > 1:4509870‑M2/3‑71 (MQ=255) aaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCttt < 1:3390373‑M2/69‑1 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATtgcac > 1:7351842‑M2/2‑65 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTg > 1:4432696‑M2/2‑64 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:70338‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:4595160‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:7223968‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:3236532‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:2536254‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTc > 1:24267‑M2/2‑71 (MQ=255) aTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGACCTTTc > 1:6303488‑M2/2‑71 (MQ=255) | TATTCGTGATTGCATGTTAGTAAAAACTTTATGATATGGTTCGTTTTCGATTAATACTAAATTTTCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > W3110S.gb/4057478‑4057617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |