New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1773418	54 (1.170)	4 (0.100)	3/90	NT	7.4%	coding (634/1215 nt)	ydiM	predicted transporter
	?	W3110S.gb	= 1773431	52 (1.280)					coding (647/1215 nt)	ydiM	predicted transporter

CGGGTCGTCGCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1773344‑1773418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagccaTATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTATGA  <  W3110S.gb/1773431‑1773362                                                                                                                                                   CGGGTCGTCGCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTT                                                                             <  1:3887303/70‑1          GCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTA                                                                            >  1:926068/1‑62             TACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCTCTGTTCAATTATCGATTTAGCCA                                                                        >  1:3600287/1‑63              ACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCATATAAGGTA                                                               >  1:235038/1‑71                 TGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTA                                                                            >  1:3958283/1‑55                        AAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTT                                                                             >  1:2117926/1‑47                         AGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCATATAAGGTATAACTGGCTAA                                                    <  1:1198325/71‑1                         AGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCATATAAGGTATAACTGGCTAA                                                    <  1:892256/71‑1                                          ACGGAACATCGCTGTTCAATTATCGATTTAGCCATATAAGGTATAACTGGCTAAAT                                                  >  1:1664917/1‑56                                                                      TAGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTT       <  1:2869118/71‑1                                                                      TAGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTT       <  1:513619/71‑1                                                                      TAGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCC                           <  1:1796161/51‑1                                                                      TAGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGA                                 <  1:2286268/45‑1                                                                       AGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTT       >  1:2243933/1‑70                                                                       AGCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTC         >  1:551199/1‑68                                                                        GCCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTT      <  1:1740909/70‑1                                                                         CCATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTAT    <  1:3774040/71‑1                                                                          CATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTATG   <  1:3752852/71‑1                                                                          CATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTATG   <  1:68867/71‑1                                                                          CATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTAT    >  1:128833/1‑70                                                                          CATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTAT    >  1:686208/1‑70                                                                          CATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTAT    >  1:3193269/1‑70                                                                           ATATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTATGA  >  1:3199380/1‑71                                                                                                                                                   CGGGTCGTCGCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1773344‑1773418 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagccaTATAAGGTATAACTGGCTAAATCGATAATTGAACAGCGATGTTCCGTAGAGCTGGTGGTTTTCTTTATGA  <  W3110S.gb/1773431‑1773362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.