New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | 2750405 = | 45 (0.970) | 4 (0.100) | 4/90 | NT | 9.0% | intergenic (+40/‑46) | yfjB/recN | NAD kinase/recombination and repair protein |
? | W3110S.gb | 2750425 = | 41 (1.010) | intergenic (+60/‑26) | yfjB/recN | NAD kinase/recombination and repair protein |
AAAGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2750480‑2750405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagtaATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTG > W3110S.gb/2750425‑2750493 AAAGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTA < 1:2573714/71‑1 AAAGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTA < 1:2578815/71‑1 AAAGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTA > 1:725653/1‑71 AGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTAga < 1:1832226/71‑3 AGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACA < 1:4065032/71‑1 AGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTA > 1:3456897/1‑69 GTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACAG < 1:4267474/71‑1 tcGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACAG < 1:2278218/68‑1 GCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACAGTA > 1:2990273/1‑70 TTCCTGTATGAAAAACCATTACTGTTATTGTGTACA > 1:1797001/1‑36 AAAAACCATTACTGTTATTGTGTACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGc > 1:414267/1‑70 GTTATTGTGTACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTT > 1:3927651/1‑71 TTATTGTGTACAGTAATGGTTTTTCATACAGGAAAA > 1:2666718/1‑36 TATTGTGTACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTG > 1:4228204/1‑71 TAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGAC < 1:876350/45‑1 AATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTG > 1:576705/1‑70 AAAGTTGCTGATGGTCAGTTGTGCCAACATAGTCGTTTTCCTGTATGAAAAACCATTACTGTTATTGTGTACAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2750480‑2750405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagtaATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTG > W3110S.gb/2750425‑2750493 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |