| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2750405 = | 45 (0.970) | 4 (0.100) | 4/90 | NT | 9.0% | intergenic (+40/‑46) | yfjB/recN | NAD kinase/recombination and repair protein |
| ? | W3110S.gb | 2750425 = | 41 (1.010) | intergenic (+60/‑26) | yfjB/recN | NAD kinase/recombination and repair protein | |||||
AATTATTCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTGA > W3110S.gb/2750355‑2750494 | aaTTATTCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTaa > 1:3211034/1‑71 (MQ=255)aaTTATTCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTaa > 1:3146346/1‑71 (MQ=255) tattCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATgg > 1:1073365/1‑71 (MQ=255) ttCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGtt < 1:2787486/71‑1 (MQ=255) cTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGtttt > 1:2804544/1‑71 (MQ=255) tAATTTTACGCCATCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGttttt > 1:2468316/1‑71 (MQ=255) gcagttgtgccaacatagtcgttttcctgtatgaaaaaccatTACTGTACACAATAACAGTAATGGttttt > 1:414267‑M1/43‑71 (MQ=255) aTTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGttttt < 1:3617839/69‑1 (MQ=255) tACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATa > 1:3311684/1‑69 (MQ=255) cAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACa > 1:707144/1‑66 (MQ=255) cAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGaa > 1:3997412/1‑70 (MQ=255) gCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAAc < 1:1434586/71‑1 (MQ=255) tACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATg > 1:4089137/1‑71 (MQ=255) tACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAAAGACTa < 1:2022127/69‑1 (MQ=255) tACTGTATATAAAACCAGTTTAAACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATg > 1:1648088/1‑71 (MQ=255) cTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGtt < 1:2510804/71‑1 (MQ=255) cTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGtt < 1:1646661/71‑1 (MQ=255) cTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGt < 1:2857403/70‑1 (MQ=255) tatataAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTgg < 1:3166413/70‑1 (MQ=255) tatataAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTgg > 1:2744305/1‑70 (MQ=255) atataAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTc > 1:3111885/1‑46 (MQ=255) taAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACaa > 1:802998/1‑71 (MQ=255) taAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACaa > 1:2389416/1‑71 (MQ=255) aaaaCCAGTTTATACTGTACACAATAACAGTAATGGttttt > 1:2679914/1‑41 (MQ=255) aaaaCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCa < 1:2089746/43‑1 (MQ=255) aaaaCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAAc > 1:2140409/1‑71 (MQ=255) aaaCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGt > 1:2619274/1‑61 (MQ=255) aaaCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACt < 1:3927167/71‑1 (MQ=255) aaCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACt > 1:1672497/1‑70 (MQ=255) aaaaaccattactgttattgtgtacagtaATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACtgc > 1:414267‑M2/30‑70 (MQ=255) aCCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGa < 1:3937606/71‑1 (MQ=255) ccAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATg > 1:2737066/1‑57 (MQ=255) ccAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAAAGACTATGTTGGCACAACTGAc > 1:2510194/1‑71 (MQ=255) cAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGAc > 1:1679195/1‑70 (MQ=255) aGTTTATACTGTACACAATAACAGTAATGGTTTTTCa > 1:2028118/1‑37 (MQ=255) aGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGtt < 1:3788159/57‑1 (MQ=255) aGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGcac < 1:2297941/62‑1 (MQ=255) aGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCa > 1:612812/1‑71 (MQ=255) gTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCAt < 1:1970320/71‑1 (MQ=255) tttATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGa < 1:1442661/66‑1 (MQ=255) ttATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATc < 1:3646461/70‑1 (MQ=255) tataCTGTACACAATAACAGTAATGGTTTTTCATa > 1:2516539/1‑35 (MQ=255) tataCTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAg > 1:3583902/1‑71 (MQ=255) tataCTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAg > 1:655086/1‑71 (MQ=255) TACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGc > 1:2990273‑M1/1‑70 (MQ=255) CTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCagcga < 1:2278218‑M1/70‑3 (MQ=255) CTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAAc < 1:4267474‑M1/71‑1 (MQ=255) tcTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACt < 1:1832226‑M1/69‑1 (MQ=255) TGTACACAATAACAGTAATGGTTTTTCATACAGGaa > 1:1797001‑M1/1‑36 (MQ=255) TGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACt < 1:4065032‑M1/71‑1 (MQ=255) gttattgtgtacagtaATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACtt > 1:3927651‑M2/17‑71 (MQ=255) ttattgtgtacagtaATGGTTTTTCATACAGGaaaa > 1:2666718‑M2/16‑36 (MQ=255) TACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACttt < 1:2578815‑M1/71‑1 (MQ=255) TACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACttt < 1:2573714‑M1/71‑1 (MQ=255) TACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACttt > 1:725653‑M1/1‑71 (MQ=255) TACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACt > 1:3456897‑M1/1‑69 (MQ=255) tattgtgtacagtaATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTg > 1:4228204‑M2/15‑71 (MQ=255) cacaATAACAGTAATGGTTTTTCATACAGGAAAACGACTa > 1:3763801/1‑40 (MQ=255) cacaATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTg > 1:4087307/1‑45 (MQ=255) caATAACAGTAATGGTTTTTCTTACTGGAAAACGACTATGTTGGCACAACTg < 1:44279/52‑1 (MQ=255) aaTAACAGTAATGGTTTTTCATACAGTAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTAt > 1:664603/1‑71 (MQ=255) aaTAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGcac > 1:1462500/1‑46 (MQ=255) aaTAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACaa > 1:4125366/1‑48 (MQ=255) aaTAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTAt > 1:4054424/1‑71 (MQ=255) aTAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGcac < 1:3534549/45‑1 (MQ=255) tAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCa < 1:898859/59‑1 (MQ=255) tAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTAtcg < 1:440949/71‑1 (MQ=255) taATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGAc < 1:876350‑M2/43‑1 (MQ=255) aATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTg > 1:576705‑M2/2‑70 (MQ=255) aTGGTTTTTCATACAGGAAAACGACTATGTTGGcaca < 1:4076485/37‑1 (MQ=255) aTGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATc > 1:533229/1‑47 (MQ=255) aTGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGATCGTGa > 1:830290/1‑70 (MQ=255) | AATTATTCTAATTTTACGCCAGCCTCTTTACTGTATATAAAACCAGTTTATACTGTACACAATAACAGTAATGGTTTTTCATACAGGAAAACGACTATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTGA > W3110S.gb/2750355‑2750494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |