New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	3152775 =	69 (1.490)	3 (0.070)	3/90	NT	5.1%	coding (557/660 nt)	yghB	conserved inner membrane protein
	?	W3110S.gb	3152797 =	52 (1.280)					coding (579/660 nt)	yghB	conserved inner membrane protein

ACCACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/3152850‑3152775 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgatGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATA  >  W3110S.gb/3152797‑3152865                                                                                                                                                   ACCACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTAC                                                                            >  1:2197940/1‑71   CACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCT                                                                          >  1:3557624/1‑71   CACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCT                                                                          <  1:715861/71‑1   CACAAACAGCGTGCCTAACAAGCCAG‑GGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCT                                                                          >  1:3086282/1‑70    ACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTG                                                                         <  1:1628560/71‑1    ACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTAC                                                                            <  1:392957/68‑1     CAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTGA                                                                        >  1:4073174/1‑71     CAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTGA                                                                        <  1:2450208/71‑1       AACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGATCGTCATTACCTGAT                                                                       >  1:4250304/1‑70                    ACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTAC                                                                            >  1:3760542/1‑52                               GTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTG                                                                         <  1:1788013/44‑1                               GTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTG                                                                         <  1:1890723/44‑1                                                     TCATCAGGAACGTCATTACCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGT                        >  1:3289416/1‑71                                                      CATCAGGAACGTCATTACCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTT                       >  1:175264/1‑71                                                        TCAGGAACGTCATTACCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTG                     <  1:3453819/71‑1                                                                       CCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAA        >  1:1158338/1‑69                                                                        CTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAA      <  1:2201736/70‑1                                                                        CTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAA      <  1:147674/70‑1                                                                        CTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAA      <  1:1441092/70‑1                                                                           ATGATCCTTCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAA    <  1:229831/69‑1                                                                           ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATA  >  1:1559167/1‑71                                                                           ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAAT   <  1:3757755/70‑1                                                                           ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAA    <  1:1429360/69‑1                                                                           ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGC                               >  1:2888427/1‑42                                                                           ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTCTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAA    <  1:3767481/69‑1                                                                           ATGAACCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCAC                             >  1:3193931/1‑44                                                                                                                                                   ACCACAAACAGCGTGCCTAACAAGCCAGCGGTTAACAAGGCAATTGGCAGGATCATCAGGAACGTCATTACCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/3152850‑3152775 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgatGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATA  >  W3110S.gb/3152797‑3152865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.