| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1098035 = | 33 (0.710) | 3 (0.070) | 3/90 | NT | 8.6% | intergenic (‑142/‑92) | serX/ycdW | tRNA‑Ser/2‑ketoacid reductase |
| ? | W3110S.gb | 1098067 = | 35 (0.860) | intergenic (‑174/‑60) | serX/ycdW | tRNA‑Ser/2‑ketoacid reductase | |||||
TTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCG > W3110S.gb/1097965‑1098103 | ttGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTg > 1:2421790/1‑71 (MQ=255) gAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGc < 1:1125778/70‑1 (MQ=255) tatccatactgactcccgaaaagcgttgtgcgaaatttattcgcacttatcgttatgatctacaaagGCCa > 1:2371993‑M1/68‑71 (MQ=255) aaaaTCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCAcc < 1:939358/71‑1 (MQ=255) aaaaTCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCAcc < 1:2414299/71‑1 (MQ=255) cgcgcgTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCa > 1:2638606/1‑71 (MQ=255) cgTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACgg < 1:1287063/70‑1 (MQ=255) actcccgaaaagcgttgtgcgaaatttattcgcacttatcgttatgatctacaaagGcc > 1:3655473‑M1/57‑59 (MQ=255) cAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTa < 1:1356371/70‑1 (MQ=255) cAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTa < 1:2218405/70‑1 (MQ=255) aagcgttgtgcgaaatttattcgcacttatcgttatgatctacaaagg > 1:3693366‑M1/48‑48 (MQ=255) aaaCTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGAGCACGGATTTGTTAt < 1:1528811/70‑1 (MQ=255) aaCTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTg < 1:2338438/65‑1 (MQ=255) aCTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCt < 1:1097467/71‑1 (MQ=255) caatcaatGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCtggt < 1:2996221/70‑1 (MQ=255) aatGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCtt > 1:2830674/1‑71 (MQ=255) aatGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCtt > 1:1361940/1‑71 (MQ=255) atGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGa < 1:2086869/50‑1 (MQ=255) atGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTg < 1:388613/54‑1 (MQ=255) aaatttattcgcacttatcgttatgatctacaaagGCCACCGACCACGGATTTGTTa < 1:3263291‑M1/22‑1 (MQ=255) aaatttattcgcacttatcgttatgatctacaaagGCCACCGACCACGGATTTGTTATGCTGGTGGCCttt > 1:1732084‑M1/36‑71 (MQ=255) ttattcgcacttatcgttatgatctacaaagGCCACCGACCACGGATTTGTTATGCtggtgg < 1:560395‑M1/31‑1 (MQ=255) tgGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGa < 1:3407457/71‑1 (MQ=255) gTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGAt > 1:2145190/1‑70 (MQ=255) ttttAAAAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTAt < 1:1041823/50‑1 (MQ=255) ttAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTAGTAGATCAt > 1:3656437/1‑70 (MQ=255) aataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGAtt > 1:251689/1‑40 (MQ=255) aataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAAc > 1:252545/1‑71 (MQ=255) aataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAAc > 1:1639195/1‑71 (MQ=255) ataaGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACg < 1:1288471/71‑1 (MQ=255) gCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATaa < 1:3917488/71‑1 (MQ=255) gAAATCTGCTTTTTTTGCCACCGACCACGGATTTGtt > 1:3526185/1‑37 (MQ=255) gAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGt > 1:674768/1‑71 (MQ=255) aTCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGc > 1:2930323/1‑70 (MQ=255) aTCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGc > 1:668963/1‑70 (MQ=255) aTCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCg < 1:229938/71‑1 (MQ=255) tCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCt < 1:819776/38‑1 (MQ=255) tGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGaa > 1:2478324/1‑70 (MQ=255) tGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGaa > 1:31046/1‑70 (MQ=255) cTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATaa > 1:1651228/1‑61 (MQ=255) tttttttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATaaa > 1:2173438/1‑71 (MQ=255) tttttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAAt < 1:1255403/70‑1 (MQ=255) tttttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAAt < 1:4083951/70‑1 (MQ=255) tttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTa > 1:3336715/1‑42 (MQ=255) tttGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAAttt < 1:365274/70‑1 (MQ=255) tGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCg > 1:3277772/1‑70 (MQ=255) tGCCACCGACCACGGATTAGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCg < 1:2076965/70‑1 (MQ=255) | TTGAAAAAATCGCGCGTTTATTCAAACTTCAATCAATGTGTGGTTTTAATAAGCGAAATCTGCTTTTTTTGCCACCGACCACGGATTTGTTATGCTGGTGGCCTTTGTAGATCATAACGATAAGTGCGAATAAATTTCG > W3110S.gb/1097965‑1098103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |