| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2855747 | 21 (0.450) | 17 (0.370) | 11/100 | NT | 31.0% | intergenic (‑285/‑2) | ygbA/mutS | hypothetical protein/methyl‑directed mismatch repair protein |
| ? | W3110S.gb | 4124505 = | 55 (1.210) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
TTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAG > W3110S.gb/2855681‑2855817 | ttATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt > 1:2141176/1‑70 (MQ=255) ttACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCaa > 1:998240/1‑70 (MQ=255) cGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGaaaa > 1:2132749/1‑71 (MQ=255) gAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAAt > 1:1297512/1‑71 (MQ=255) aTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCAt < 1:732696/51‑1 (MQ=255) aTAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTc > 1:314423/1‑70 (MQ=255) aaaaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGac < 1:1433666/70‑1 (MQ=255) aaCCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATg < 1:823573/47‑1 (MQ=255) ccATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCCacgccca < 1:1666740/71‑1 (MQ=255) tCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatac > 1:4036708/1‑71 (MQ=255) cacaCCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacg > 1:1058097/1‑71 (MQ=255) cacCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcc < 1:45715/71‑1 (MQ=255) cccATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:1134987/1‑71 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc > 1:779844‑M1/3‑31 (MQ=255) aatTTAATATCAGTAAGCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcag > 1:842587‑M1/2‑30 (MQ=255) aatTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcag > 1:2185561‑M1/2‑30 (MQ=255) aTTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgccca < 1:3265051/59‑1 (MQ=255) aTTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGacgc < 1:2156569/56‑1 (MQ=255) tttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagt < 1:2498356‑M1/71‑44 (MQ=255) tttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaa > 1:2976159‑M1/1‑28 (MQ=255) tttAATATCAGTAAACCGGACATAACCCatgaagaaaaat < 1:3009564‑M1/40‑13 (MQ=255) tatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgg < 1:2862287‑M1/53‑31 (MQ=255) gtaaaccgGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccct < 1:2191481‑M1/65‑51 (MQ=255) taaaccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgctt < 1:2559581‑M1/69‑55 (MQ=255) taaaccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcag < 1:3304645‑M1/49‑35 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttga > 1:2452176‑M1/1‑15 (MQ=255) aaCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaag < 1:2119432‑M1/57‑43 (MQ=255) aaCCGGACATAACCCCATGAGTGCAATAGAAAAttt > 1:2538809/1‑36 (MQ=255) aCCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgat < 1:2751914‑M1/71‑58 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatg < 1:2044336‑M1/71‑59 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatg < 1:3599795‑M1/71‑59 (MQ=255) cGGACATAACCCCATGAGTGCAATAGAAAATTTCGa > 1:375672/1‑36 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGacgcccatacgcccat > 1:459406/1‑50 (MQ=255) ggACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt > 1:1324975/1‑71 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgata < 1:3973386‑M1/71‑62 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt < 1:3545686/70‑1 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt > 1:3299020/1‑70 (MQ=255) gACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCt > 1:3294214/1‑70 (MQ=255) cATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGa > 1:863248/1‑70 (MQ=255) aTAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:1215903‑M1/1‑7 (MQ=255) tAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAt < 1:402535/58‑1 (MQ=255) aaCCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc < 1:3517334‑M1/44‑40 (MQ=255) aCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc < 1:1272422/71‑1 (MQ=255) aCCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc < 1:2064650/71‑1 (MQ=255) ccccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGcc > 1:3937875/1‑70 (MQ=255) cccatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtat > 1:3036573‑M1/1‑3 (MQ=255) ccATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAg > 1:3858823/1‑71 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgcttgatgatattaaacgg > 1:2634799‑M1/1‑1 (MQ=255) catgaagaaaaatcgcgcttttttgaagtgggcagggggcaag < 1:2993808‑M1/43‑43 (MQ=255) | TTATGTGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAG > W3110S.gb/2855681‑2855817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |