| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 390073 = | 70 (1.400) | 7 (0.160) | 4/88 | NT | 10.7% | coding (599/1461 nt) | yaiT | hypothetical protein |
| ? | W3110S.gb | 390095 = | 56 (1.300) | coding (621/1461 nt) | yaiT | hypothetical protein | |||||
Only 100 of 101 total aligned reads displayed.
ATAAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAA > W3110S.gb/390004‑390142 | gtgtaggtttcgttgtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaatatt < 1:1427071‑M1/2‑1 (MQ=255)ataAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCtt > 1:2458108/1‑71 (MQ=255) tgtaggtttcgttgtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTg > 1:1819177‑M1/69‑71 (MQ=255) tgtaggtttcgttgtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTg > 1:650345‑M1/69‑71 (MQ=255) taAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCtt < 1:4269132/70‑1 (MQ=255) taAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCtt > 1:3818061/1‑70 (MQ=255) taAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTg < 1:4476840/71‑1 (MQ=255) taAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATAtt < 1:904707/70‑1 (MQ=255) taggtttcgttgtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTGAt < 1:139257‑M1/5‑1 (MQ=255) aaGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGAt > 1:4022064/1‑71 (MQ=255) aGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATATTGATg > 1:4008323/1‑71 (MQ=255) gATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATg > 1:2593685/1‑70 (MQ=255) gTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGa < 1:2484020/70‑1 (MQ=255) aTGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAg > 1:3078900/1‑70 (MQ=255) aTGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt < 1:157550/71‑1 (MQ=255) tGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt > 1:4538432/1‑70 (MQ=255) gtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTGAt < 1:1155076‑M1/5‑1 (MQ=255) gtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAg > 1:4136267‑M1/56‑68 (MQ=255) gtaagtattaccttgagataatgcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAg > 1:1272419‑M1/56‑68 (MQ=255) tAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAg > 1:3151615/1‑67 (MQ=255) tAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAg > 1:2566992/1‑67 (MQ=255) agtattaccttgagataatgcaatacctgcaacgcgggagttattggaaaaaTTGAt < 1:576254‑M1/5‑1 (MQ=255) aCCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTaa > 1:444980/1‑68 (MQ=255) aCCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACAt > 1:1709320/1‑71 (MQ=255) ccAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACAt > 1:1207362/1‑70 (MQ=255) cAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTa > 1:79218/1‑58 (MQ=255) cAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCa < 1:2321248/71‑1 (MQ=255) aGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCaa > 1:3020755/1‑70 (MQ=255) gCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTaa > 1:1235297/1‑63 (MQ=255) ccttgagataatgcaatacctgcaacgcgggagttattggaaatatt > 1:1410725‑M1/46‑47 (MQ=255) acaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTc > 1:1531344/1‑71 (MQ=255) caAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCaa > 1:1186139/1‑64 (MQ=255) aaaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:296386/1‑70 (MQ=255) aaaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCa < 1:2972558/71‑1 (MQ=255) aaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa < 1:4590795/71‑1 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTg > 1:396031/1‑42 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTg > 1:2670760/1‑42 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt > 1:675390/1‑53 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata > 1:3676733/1‑63 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:1002224/1‑70 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3837901/71‑1 (MQ=255) gaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACt < 1:3693929/71‑1 (MQ=255) gcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAGTAACAt < 1:3981236‑M1/19‑1 (MQ=255) gcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAGTAACAt < 1:3803404‑M1/19‑1 (MQ=255) gcaatacctgcaacgcgggagttattggaaataTTGATGTAGAAAGTAACAt < 1:534647‑M1/19‑1 (MQ=255) cATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTcc > 1:3004712/1‑71 (MQ=255) caatacctgcaacgcgggagttattggaaataTTGAt < 1:3929682‑M1/5‑1 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt < 1:2054640/45‑1 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt < 1:4376222/45‑1 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGt < 1:687568/45‑1 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcg > 1:1981717/1‑71 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:4430294/1‑63 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:3862015/1‑63 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:3281081/1‑71 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:2849757/1‑71 (MQ=255) tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgcg > 1:771830/1‑71 (MQ=255) tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgcg > 1:4535528/1‑71 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAAc > 1:2808950/1‑45 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:3236838/1‑62 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:3378979/1‑62 (MQ=255) tACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGtt < 1:206680/70‑1 (MQ=255) tACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTg < 1:3993059/71‑1 (MQ=255) gcaacgcgggagttattggaaataTTGATGTAGAAAGTAAc > 1:4475688‑M1/25‑41 (MQ=255) cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGc < 1:1465520/70‑1 (MQ=255) cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCa < 1:3680265/71‑1 (MQ=255) aaGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACAt > 1:4244608/1‑42 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata < 1:1294595/45‑1 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGt < 1:3200304/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:3688045/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:825993/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:3513107/71‑1 (MQ=255) gcgggagttattggaaataTTGATGTAGAAAGTAACAt > 1:3349148‑M1/20‑38 (MQ=255) gAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:2068767/70‑1 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAtt > 1:3892102/1‑71 (MQ=255) aGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg < 1:4382391/71‑1 (MQ=255) aGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg > 1:4354950/1‑71 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:1423068/47‑1 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3349397/47‑1 (MQ=255) gTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:3013928/42‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt < 1:4416177/39‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg < 1:2925678/66‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACT‑CCGCGTTGCAgg < 1:3950269/60‑1 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:2313826/1‑71 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:1931162/1‑71 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:1612699/1‑71 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtct < 1:2942419/71‑1 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtc > 1:1442513/1‑70 (MQ=255) tGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:1432950/1‑37 (MQ=255) gTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGc < 1:597543/53‑1 (MQ=255) ttAATCTTGATGTAGATAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCa < 1:4166757/70‑1 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:3121881/1‑39 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCa < 1:4112856/70‑1 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAg > 1:3145116/1‑71 (MQ=255) aaTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:1832270/1‑71 (MQ=255) aaTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:1814826/1‑71 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:2273683/1‑37 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:2697967/1‑37 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGt < 1:1954942/71‑1 (MQ=255) cTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa > 1:1803176/1‑71 (MQ=255) TTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa < 1:2817774‑M1/70‑1 (MQ=255) | ATAAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAA > W3110S.gb/390004‑390142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |