| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 390073 = | 70 (1.400) | 7 (0.160) | 4/88 | NT | 10.7% | coding (599/1461 nt) | yaiT | hypothetical protein |
| ? | W3110S.gb | 390095 = | 56 (1.300) | coding (621/1461 nt) | yaiT | hypothetical protein | |||||
ACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACAC > W3110S.gb/390030‑390163 | acaAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTc > 1:1531344/1‑71 (MQ=255) aaaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:296386/1‑70 (MQ=255) aaaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCa < 1:2972558/71‑1 (MQ=255) aaTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa < 1:4590795/71‑1 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata > 1:3676733/1‑63 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCaa > 1:1002224/1‑70 (MQ=255) aTGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3837901/71‑1 (MQ=255) gaCATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACt < 1:3693929/71‑1 (MQ=255) cATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTcc > 1:3004712/1‑71 (MQ=255) tttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcg > 1:1981717/1‑71 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:4430294/1‑63 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:3862015/1‑63 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:2849757/1‑71 (MQ=255) ttGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgc > 1:3281081/1‑71 (MQ=255) tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgcg > 1:771830/1‑71 (MQ=255) tGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCcgcg > 1:4535528/1‑71 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:3236838/1‑62 (MQ=255) gATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:3378979/1‑62 (MQ=255) tACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGtt < 1:206680/70‑1 (MQ=255) tACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTg < 1:3993059/71‑1 (MQ=255) cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGc < 1:1465520/70‑1 (MQ=255) cAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCa < 1:3680265/71‑1 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAata < 1:1294595/45‑1 (MQ=255) gTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGt < 1:3200304/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:3688045/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:825993/71‑1 (MQ=255) tGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:3513107/71‑1 (MQ=255) gAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTa < 1:2068767/70‑1 (MQ=255) aaGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTAtt > 1:3892102/1‑71 (MQ=255) aGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg < 1:4382391/71‑1 (MQ=255) aGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg > 1:4354950/1‑71 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:1423068/47‑1 (MQ=255) gCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAAt < 1:3349397/47‑1 (MQ=255) gTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc < 1:3013928/42‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATAttt < 1:4416177/39‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTg < 1:2925678/66‑1 (MQ=255) ttGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACT‑CCGCGTTGCAgg < 1:3950269/60‑1 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:1612699/1‑71 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:2313826/1‑71 (MQ=255) tGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAt > 1:1931162/1‑71 (MQ=255) gCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtc > 1:93785/1‑71 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtct < 1:2942419/71‑1 (MQ=255) cTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTAtc > 1:1442513/1‑70 (MQ=255) tGTTAATCTTGATGTAGAAAGTAACATCAATATTTcc > 1:1432950/1‑37 (MQ=255) gTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGc < 1:597543/53‑1 (MQ=255) ttAATCTTGATGTAGATAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCa < 1:4166757/70‑1 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATa > 1:3121881/1‑39 (MQ=255) ttAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCa < 1:4112856/70‑1 (MQ=255) tAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAg > 1:3145116/1‑71 (MQ=255) aaTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:1814826/1‑71 (MQ=255) aaTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:1832270/1‑71 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:2697967/1‑37 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATaa > 1:2273683/1‑37 (MQ=255) aTCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGt < 1:1954942/71‑1 (MQ=255) cTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa > 1:1803176/1‑71 (MQ=255) TTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTaa < 1:2817774‑M1/70‑1 (MQ=255) atgttactttctacatcaaTATTTCCAATAACTCCcgc > 1:3349148‑M2/20‑38 (MQ=255) atgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGc < 1:3803404‑M2/33‑1 (MQ=255) atgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGc < 1:3981236‑M2/33‑1 (MQ=255) atgttactttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGc < 1:534647‑M2/33‑1 (MQ=255) TGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACt < 1:1369365‑M1/70‑1 (MQ=255) gttactttctacatcaaTATTTCCAATAACTCCCGCGTTGc > 1:4475688‑M2/18‑41 (MQ=255) gAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCa > 1:3834170/1‑39 (MQ=255) gAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:2350101/1‑59 (MQ=255) gAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACa < 1:1220857/70‑1 (MQ=255) ctttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTAc > 1:1272419‑M2/14‑68 (MQ=255) ctttctacatcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTAc > 1:4136267‑M2/14‑68 (MQ=255) aaaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:2510187/1‑71 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:3097229/1‑70 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:1663430/1‑70 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:1838637/1‑70 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:1983186/1‑70 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAAc > 1:2250408/1‑70 (MQ=255) aaGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACg < 1:2374886/71‑1 (MQ=255) aaCATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCAt > 1:4520773/1‑43 (MQ=255) atcaaTTTTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACt < 1:576254‑M2/52‑1 (MQ=255) atcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTg < 1:3929682‑M2/32‑1 (MQ=255) atcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTAc < 1:1155076‑M2/55‑1 (MQ=255) atcaaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTa < 1:139257‑M2/66‑1 (MQ=255) caaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTaca > 1:1819177‑M2/4‑71 (MQ=255) caaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTaca > 1:650345‑M2/4‑71 (MQ=255) aaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAgg > 1:1410725‑M2/3‑47 (MQ=255) aaTATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTacac < 1:1427071‑M2/69‑1 (MQ=255) | ACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACAC > W3110S.gb/390030‑390163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |