| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2340750 = | 64 (1.280) | 4 (0.090) | 3/90 | NT | 6.8% | coding (565/1689 nt) | yfaA | hypothetical protein |
| ? | W3110S.gb | 2340779 = | 54 (1.220) | coding (536/1689 nt) | yfaA | hypothetical protein | |||||
GGAAAACACCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTCGCTG > W3110S.gb/2340682‑2340820 | ggAAAACACCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGa > 1:3131142/1‑70 (MQ=255) gAAAACACCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGAt < 1:224744/70‑1 (MQ=255) gagccattgttgtttgccgctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGATaaa > 1:785746‑M1/66‑71 (MQ=255) gagccattgttgtttgccgctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGATa > 1:1410763‑M1/66‑69 (MQ=255) aaaCACCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATaaa < 1:3132946/71‑1 (MQ=255) cacCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAg > 1:706229/1‑71 (MQ=255) cAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGaa > 1:4286400/1‑71 (MQ=255) gCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGaa > 1:57402/1‑69 (MQ=255) gCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGaa > 1:3303111/1‑69 (MQ=255) cATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATaa > 1:3161301/1‑61 (MQ=255) ttGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACACGAACAGttt > 1:693246/1‑70 (MQ=255) gTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGttt < 1:4041558/68‑1 (MQ=255) gTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGtt < 1:1207552/67‑1 (MQ=255) gTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTc < 1:4009626/69‑1 (MQ=255) gTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCAc > 1:972094/1‑71 (MQ=255) ccgctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGAt > 1:978233‑M1/50‑52 (MQ=255) ccgctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGATAAACAGGAACAGTTTCa < 1:4580155‑M1/20‑1 (MQ=255) ccTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATa > 1:2477436/1‑52 (MQ=255) gctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGATaa < 1:4022299‑M1/5‑1 (MQ=255) cTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTAt < 1:1255632/71‑1 (MQ=255) tGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTAtt > 1:585710/1‑71 (MQ=255) ctaccagcgacagccagttaagcaaaacggaaatcagtagcatcaaGATAAACAGGAACAGTTTCACTAtt < 1:909918‑M1/25‑1 (MQ=255) aTAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATaaa > 1:660535/1‑50 (MQ=255) tAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTAt < 1:2867383/71‑1 (MQ=255) tAAGTCGCGAACATCAGGGCGTTATTCCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTa < 1:1282672/70‑1 (MQ=255) aGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCt < 1:130689/71‑1 (MQ=255) gcgacagccagttaagcaaaacggaaatcagtagcatcaaGATaaa > 1:4485997‑M1/41‑46 (MQ=255) gcgacagccagttaagcaaaacggaaatcagtagcatcaaGATaaa > 1:2874572‑M1/41‑46 (MQ=255) gcgacagccagttaagcaaaacggaaatcagtagcatcaaGATaaa > 1:3075542‑M1/41‑46 (MQ=255) gTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCtt > 1:3583997/1‑71 (MQ=255) gTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCtt < 1:842113/71‑1 (MQ=255) gTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCtt > 1:842312/1‑71 (MQ=255) tCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGtt > 1:3986256/1‑56 (MQ=255) tCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGtt > 1:517399/1‑56 (MQ=255) tCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGtt > 1:271551/1‑56 (MQ=255) gcgAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCa > 1:4266627/1‑57 (MQ=255) gcgAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGAt < 1:1927805/71‑1 (MQ=255) cgAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATg < 1:2093801/71‑1 (MQ=255) gAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATaa < 1:2191725/40‑1 (MQ=255) gAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGc < 1:2721665/71‑1 (MQ=255) gAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGc < 1:864512/71‑1 (MQ=255) gAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGc < 1:1798898/71‑1 (MQ=255) agccaggtaagcaaaacggaaatcagtagcatcaaGATaaa < 1:4442362‑M1/6‑1 (MQ=255) ccagttaagcaaaacggaaatcagtagcatcaaGATaaa > 1:179476‑M1/34‑39 (MQ=255) aCATCAGGGCGTTATTGCCGTTATAGCGCAACTGATaaa > 1:4079374/1‑39 (MQ=255) aCATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAg > 1:1615237/1‑42 (MQ=255) aCATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGtt > 1:1834/1‑50 (MQ=255) aCATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTa > 1:1765310/1‑71 (MQ=255) aCATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTa > 1:610914/1‑71 (MQ=255) cATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACt > 1:2450598/1‑54 (MQ=255) ggCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGAttt < 1:58306/71‑1 (MQ=255) gCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTg > 1:1766654/1‑66 (MQ=255) cGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTcc < 1:751263/71‑1 (MQ=255) gTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCg < 1:2148389/71‑1 (MQ=255) aaaacggaaatcagtagcatcaaGATAAACAGGAACAGTTTCACt > 1:207919‑M1/24‑45 (MQ=255) aaaacggaaatcagtagcatcaaGATAAACAGGAACAGTTTCACt > 1:2382347‑M1/24‑45 (MQ=255) ttATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGa < 1:3283796/55‑1 (MQ=255) aTTGCCGTTATAGCGCAACTGATAAACAGGAACAg > 1:1127212/1‑35 (MQ=255) aTTGCCGTTATAGCGCAACTGATAAACAGGAACAg > 1:2675670/1‑35 (MQ=255) aTTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTTATTTc < 1:1254238/66‑1 (MQ=255) aTTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGttt > 1:2350266/1‑71 (MQ=255) ttGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGtttt > 1:3125679/1‑71 (MQ=255) ttGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGtttt > 1:2424969/1‑71 (MQ=255) gCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGAt > 1:3894895/1‑51 (MQ=255) gCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTg < 1:1757952/70‑1 (MQ=255) ccGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTAttt < 1:3185504/42‑1 (MQ=255) ccGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCg < 1:3889699/64‑1 (MQ=255) cGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCtt < 1:1012644/71‑1 (MQ=255) cGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCtt < 1:2252353/71‑1 (MQ=255) gTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTAc > 1:1435989/1‑53 (MQ=255) gTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGt > 1:2775116/1‑63 (MQ=255) ttATAGCGCAACTGATAAACAGGAACAGTTTCACt < 1:4001172/35‑1 (MQ=255) ttATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTaa > 1:403604/1‑71 (MQ=255) ttATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTaa < 1:271820/71‑1 (MQ=255) ataGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCtt > 1:3956753/1‑42 (MQ=255) ataGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGa > 1:3383228/1‑44 (MQ=255) ataGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAAc < 1:1503097/70‑1 (MQ=255) ataGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACt > 1:696840/1‑71 (MQ=255) gcgcAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCtt < 1:2689190/64‑1 (MQ=255) gcgcAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTgg < 1:2660019/70‑1 (MQ=255) cgcAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCt > 1:3147970/1‑62 (MQ=255) gcAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAAc > 1:688940/1‑65 (MQ=255) aaCTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTc > 1:1770953/1‑71 (MQ=255) cTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTCga > 1:2302805/1‑70 (MQ=255) cTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTCGc > 1:3063195/1‑71 (MQ=255) cTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTCGc < 1:2743828/71‑1 (MQ=255) cTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGGTTTGCTTAACTGGCTGTCGc < 1:3825030/71‑1 (MQ=255) GATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTaa < 1:1538920‑M1/58‑1 (MQ=255) GATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCATTTTGCTTAACTGGCTGTCGCTg < 1:3452454‑M1/71‑1 (MQ=255) GATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCATTTTGCTTAACTGGCTGTCGCTg < 1:3457922‑M1/71‑1 (MQ=255) | GGAAAACACCAGCATCTTGTCCTGATAAGTCGCGAACATCAGGGCGTTATTGCCGTTATAGCGCAACTGATAAACAGGAACAGTTTCACTATTTATCTTGATGCTACTGATTTCCGTTTTGCTTAACTGGCTGTCGCTG > W3110S.gb/2340682‑2340820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |