| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3589856 = | 40 (0.800) | 3 (0.070) | 3/86 | NT | 8.9% | intergenic (‑141/‑223) | polA/yihG | fused DNA polymerase I 5'‑>3' exonuclease, 3'‑>5' polymerase and 3'‑>5' exonuclease/predicted endonuclease |
| ? | W3110S.gb | 3589885 = | 28 (0.660) | intergenic (‑170/‑194) | polA/yihG | fused DNA polymerase I 5'‑>3' exonuclease, 3'‑>5' polymerase and 3'‑>5' exonuclease/predicted endonuclease | |||||
GCTTTTCGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGTTTTTCAT > W3110S.gb/3589788‑3589926 | ttagtgatggatttatttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataata > 1:2368625‑M1/69‑71 (MQ=255)ttagggatggatttatttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataata > 1:860783‑M1/69‑71 (MQ=255)ttagggatggatttatttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataac > 1:2932400‑M1/69‑69 (MQ=255)ttagcgatggatttatttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataat > 1:2932398‑M1/69‑70 (MQ=255) ttttCGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATaaa > 1:239799/1‑71 (MQ=255) ttttCGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATaaa > 1:3397177/1‑71 (MQ=255) cGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAatta < 1:221784/70‑1 (MQ=255) cGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAatt < 1:4296707/69‑1 (MQ=255) atggatttatttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataATAAatta < 1:3259763‑M1/8‑1 (MQ=255) aaaTCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACa > 1:3781170/1‑71 (MQ=255) aaTCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACAt < 1:118194/71‑1 (MQ=255) tCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCg > 1:3716383/1‑71 (MQ=255) atttttaactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataATAAat < 1:2636851‑M1/6‑1 (MQ=255) cTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGc > 1:2578647/1‑71 (MQ=255) tGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCttt > 1:161041/1‑70 (MQ=255) gTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCtttt < 1:3366550/70‑1 (MQ=255) gTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCtttt < 1:3361077/70‑1 (MQ=255) gTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCtttt > 1:1199942/1‑70 (MQ=255) gTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCttt > 1:3558115/1‑69 (MQ=255) aactgcatgaaaaacaaagacaaacatcatgctgtaaaaagcatgataATAAATTATTTACATCGCtttt < 1:815386‑M1/22‑1 (MQ=255) tAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTa < 1:4360203/70‑1 (MQ=255) tcttctGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAat < 1:199644/49‑1 (MQ=255) cttctGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATtta > 1:1239224/1‑70 (MQ=255) gaaaaacaaagacaaacatcatgctgtaaaaagcatgataATAAATTATTTACATCGCt > 1:4353951‑M1/41‑59 (MQ=255) ctGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACAt > 1:1579484/1‑54 (MQ=255) ctGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAAttt < 1:2379322/66‑1 (MQ=255) ctGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAAttt < 1:200810/66‑1 (MQ=255) aaaaacaaagacaaacatcatgctgtaaaaagcatgataATaaa < 1:3378177‑M1/5‑1 (MQ=255) aaaaacaaagacaaacatcatgctgtaaaaagcatgataATAAATTATTTACATCGCTTTTAATttatta > 1:2562818‑M1/40‑70 (MQ=255) gATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATc < 1:2083187/69‑1 (MQ=255) gATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCa < 1:3954708/70‑1 (MQ=255) aTCGCTCGCAAATTGTCATGTGGATAACTTTGTGCATAAatt < 1:3772301/42‑1 (MQ=255) cgctcgcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCt > 1:4551272/1‑71 (MQ=255) cgctcgcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATAGCTTTTAATTTATTATCATGc < 1:1986027/70‑1 (MQ=255) gctcgcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCtt > 1:3116131/1‑71 (MQ=255) ctcgcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGc < 1:2760232/49‑1 (MQ=255) ctcgcAAATCGTCATGTGGATAACTTTGTGAATAAATTATTTa > 1:2601155/1‑43 (MQ=255) gcAAATCGTCATGTGGATAACTTTGTGCATAAatta > 1:3693430/1‑36 (MQ=255) gcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCttt < 1:3321235/49‑1 (MQ=255) gcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTtattat > 1:2005314/1‑60 (MQ=255) gcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCtttt < 1:3408239/69‑1 (MQ=255) gcAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCtttt < 1:553265/69‑1 (MQ=255) cAAATCGTCATGTGGATAACTTTGTGCATAAatta < 1:3948600/35‑1 (MQ=255) aaaTCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATc < 1:2533229/59‑1 (MQ=255) tCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCa > 1:617959/1‑71 (MQ=255) tCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCatga < 1:2733488/71‑1 (MQ=255) tgtgGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGt < 1:3868521/71‑1 (MQ=255) tgGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATttatt < 1:329079/45‑1 (MQ=255) aTAAATTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGt > 1:1916440/1‑70 (MQ=255) aaCTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTa > 1:2967628/1‑53 (MQ=255) tttGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCtt < 1:3134774/68‑1 (MQ=255) tttGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTg > 1:3301410/1‑70 (MQ=255) tgtgCATAAATTATTTACATCGCTTTTAATttatta > 1:281600/1‑36 (MQ=255) tgtgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTAAAGCATGATGTTTGTCTTTGt < 1:1137069/69‑1 (MQ=255) tgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTGTTTGtttt < 1:648680/70‑1 (MQ=255) tgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGttttt < 1:1144093/71‑1 (MQ=255) tgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGttttt < 1:381053/71‑1 (MQ=255) tgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGttttt < 1:2578497/71‑1 (MQ=255) tgCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGtttt < 1:1617968/70‑1 (MQ=255) gCATATATTATTTAGATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGt < 1:2631066/66‑1 (MQ=255) cATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGTTTTTCa < 1:2319961/71‑1 (MQ=255) ATAAATTATTTACATCGCTTTTAATTTATTATCATGCtttt > 1:942222‑M1/1‑41 (MQ=255) ATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTg < 1:928459‑M1/63‑1 (MQ=255) ATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGTTTTTCAt > 1:1697101‑M1/1‑71 (MQ=255) | GCTTTTCGTGAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTTTAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGTTTTTCAT > W3110S.gb/3589788‑3589926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |