Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3112610	3112624	15	9 [0]	[0] 49	pppA	bifunctional prepilin leader peptidase and methylase

TAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGC  >  W3110S.gb/3112549‑3112609                                                             | tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:1044868/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:20019/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:299357/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:624657/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:664704/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:820572/61‑1 (MQ=255) tAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:873283/61‑1 (MQ=255)  aaaaaCATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:627926/60‑1 (MQ=255)                      ggTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGc  <  1:845134/40‑1 (MQ=255)                                                             | TAAAAACATCGGGCAGCCATTGGTGATCGAGGTCGATGACACTCGCGGCAATCAGCCAGGC  >  W3110S.gb/3112549‑3112609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑