Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3112610	3112624	15	9 [0]	[0] 49	pppA	bifunctional prepilin leader peptidase and methylase

CGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTC  >  W3110S.gb/3112625‑3112685 |                                                             cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCg                         >  1:935024/1‑38 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAg         >  1:1344348/1‑54 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGt   >  1:1071245/1‑60 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGt   >  1:1237559/1‑60 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:505224/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:418018/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:506292/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:518029/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:525352/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:533917/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:534649/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:542383/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:549102/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:553078/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:556513/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:589108/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:593248/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:624171/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:654852/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:657686/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:726475/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:744763/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:761068/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:805156/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:807429/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:921269/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:154025/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1057066/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1149604/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1188829/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:119031/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1199656/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1246473/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1298324/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1316043/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1355938/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1440981/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1442885/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:504994/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:193931/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:239175/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:244815/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:24739/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:34312/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:368821/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:369333/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:406860/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:1021261/1‑61 (MQ=255) cGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTc  >  1:469378/1‑61 (MQ=255) |                                                             CGCCAGCCCCCATCCACTTTCTGGCCAGACCAGACTCGCCAGCAAAAAAGCAAGTGCTGTC  >  W3110S.gb/3112625‑3112685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑