Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1978115	1978196	82	38 [2]	[0] 14	motA	proton conductor component of flagella motor

GGAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAGAAAG  >  W3110S.gb/1978053‑1978118                                                              |     tgAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:365336/61‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:560745/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1032825/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:386607/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:393590/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:427768/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:4454/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:497145/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:533626/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:545456/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:314359/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:586900/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:63420/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:638951/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:653118/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:65946/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:675908/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:927623/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:94433/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:270910/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1151477/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1184773/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1188119/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1214936/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1330782/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1343373/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1353680/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1367926/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1418989/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1426446/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1455503/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:180150/62‑1 (MQ=255) ggAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:19542/62‑1 (MQ=255)     tAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAGAAAg  <  1:152310/62‑1 (MQ=255)      agagCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAGAAAg  <  1:1183339/61‑1 (MQ=255)       gagCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:903662/56‑1 (MQ=255)              ttGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:1109454/49‑1 (MQ=255)                gCGACCAAACTCTACGGCGATAGGCGGTGCGTAACCGTTCAGATTAg      <  1:275982/47‑1 (MQ=255)                                                              |     GGAATAGAGCGTTTTGCGACCAAACTCAACGGCGATAGGCGGTGCGTAACCGTTCAGATTAGAAAG  >  W3110S.gb/1978053‑1978118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑