Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1978115	1978196	82	38 [2]	[0] 14	motA	proton conductor component of flagella motor

AAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCA  >  W3110S.gb/1978197‑1978257 |                                                             aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCCCCATCGCATGAGCGATAAGCGCa  >  1:1274909/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAgcgc   >  1:397252/1‑60 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:1178764/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:1223110/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:1244059/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:1266251/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:1423202/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:339619/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:350429/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:491391/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:792393/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:949209/1‑61 (MQ=255) aaatCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCa  >  1:952433/1‑61 (MQ=255) aaatCCGTAAGCCAAAAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAgcgc   >  1:860160/1‑60 (MQ=255) |                                                             AAATCCGTAAGCCAATAAAATGCCGAGGAAAGTCCCCACCATCGCATGTGCGATAAGCGCA  >  W3110S.gb/1978197‑1978257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑