Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2020053	2020195	143	42 [0]	[1] 67	[fliI]–[fliJ]	[fliI],[fliJ]

AAGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCG  >  W3110S.gb/2019991‑2020052                                                              | aaGGCATTTTTGAACGCGCGGACTGGGATGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:511329/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAGGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:179504/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:560763/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1045347/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:288679/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:314768/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:448432/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:497703/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:515462/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:525377/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:250506/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:628585/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:660345/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:669904/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:693163/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:698015/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:699867/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:745172/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:923005/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:925188/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1373375/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1075607/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1124132/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:118911/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1200147/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1288968/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1330527/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1348759/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1356394/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1389158/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1415180/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1419358/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:1423452/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:171646/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:181509/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:184583/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:186267/62‑1 (MQ=255) aaGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:194211/62‑1 (MQ=255) aaGGCATTTTTCAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:5006/62‑1 (MQ=255)  aGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:815055/61‑1 (MQ=255)     cATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:241263/58‑1 (MQ=255)                     gACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCg  <  1:883503/42‑1 (MQ=255)                                                              | AAGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCG  >  W3110S.gb/2019991‑2020052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑