Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2099976	2100068	93	39 [0]	[0] 9	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

AAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAG  >  W3110S.gb/2100069‑2100130 |                                                              aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:1043652/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:158216/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:202809/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:351080/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:433374/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:644136/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:668315/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:93176/62‑1 (MQ=255) aaGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCagag  <  1:977011/62‑1 (MQ=255) |                                                              AAGGTTCGATGGTAAGTTTTTCTCGTTCTTCCTGATTATCCAGCGTTTCTGCTAATGCAGAG  >  W3110S.gb/2100069‑2100130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑