New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 315707	NA (NA)	25 (0.880)	4/108	0.3	83.3%	coding (654/687 nt)	ykgA	predicted DNA‑binding transcriptional regulator
	?	W3110S.gb	576911 =	5 (0.180)					coding (76/498 nt)	ybcS	predicted lysozyme

AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/315658‑315707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576911‑576971                                                                                                                 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA                                                              >  1:876999/1‑51              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAGCGATGG                                        >  1:2918506/1‑60              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1238943/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1523735/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1897614/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2017693/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:762232/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:537482/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:426715/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:418768/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:3091357/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2879316/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2883554/1‑62              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGT                                       >  1:1440162/1‑61              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA                                           >  1:2753531/1‑57              CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGC                                                         >  1:2844846/1‑43                     GCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGG                               >  1:102950/1‑62                                                TCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAT    >  1:2327117/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2846552/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2417456/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2348601/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2160856/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:924365/1‑62                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATT   >  1:967939/1‑61                                                  AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAG        >  1:1951483/1‑56                                                                                                                 AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/315658‑315707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576911‑576971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.