New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb = 315707NA (NA)25 (0.880) 4/108 0.3 83.3% coding (654/687 nt) ykgA predicted DNA‑binding transcriptional regulator
?W3110S.gb 576911 = 5 (0.180)coding (76/498 nt) ybcS predicted lysozyme

AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/315658‑315707
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576911‑576971
                                                                                                               
AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAA                                                              >  1:876999/1‑51
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAGCGATGG                                        >  1:2918506/1‑60
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1238943/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1523735/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:1897614/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2017693/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:762232/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:537482/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:426715/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:418768/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:3091357/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2879316/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTC                                      >  1:2883554/1‑62
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGT                                       >  1:1440162/1‑61
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGA                                           >  1:2753531/1‑57
             CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACTGGC                                                         >  1:2844846/1‑43
                    GCCTGTGTCCATATTACGTGGGTAGGATCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGG                               >  1:102950/1‑62
                                               TCAACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAT    >  1:2327117/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2846552/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2417456/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2348601/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:2160856/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  1:924365/1‑62
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATT   >  1:967939/1‑61
                                                 AACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAG        >  1:1951483/1‑56
                                                                                                               
AAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/315658‑315707
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576911‑576971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.