New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 315707	NA (NA)	25 (0.880)	4/108	0.3	83.3%	coding (654/687 nt)	ykgA	predicted DNA‑binding transcriptional regulator
	?	W3110S.gb	576911 =	5 (0.180)					coding (76/498 nt)	ybcS	predicted lysozyme

AAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576854‑576971                                                          |                                                             aaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACttg                                                          >  1:1915985/1‑60 (MQ=255) aaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACttg                                                          >  1:344382/1‑60 (MQ=255) aaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACttg                                                          >  1:925748/1‑60 (MQ=255) aaaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACttg                                                          >  1:922061/1‑60 (MQ=255)  aaGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACtt                                                           <  1:1790164/60‑2 (MQ=255)        aaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaa                                                              >  1:876999‑M2/51‑51 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGc                                                         >  1:2844846‑M2/38‑43 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAGCGATgg                                        >  1:2918506‑M2/38‑60 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGa                                           >  1:2753531‑M2/38‑57 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGt                                       >  1:1440162‑M2/38‑61 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:762232‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:537482‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:426715‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:418768‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:3091357‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:2883554‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:2879316‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:2017693‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:1897614‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:1523735‑M2/38‑62 (MQ=255)                     cgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTc                                      >  1:1238943‑M2/38‑62 (MQ=255)                            gcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAgg                               >  1:102950‑M2/31‑62 (MQ=255)                                                       tcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGatat    >  1:2327117‑M2/4‑62 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAg        >  1:1951483‑M2/2‑56 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt   >  1:967939‑M2/2‑61 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTg  >  1:2846552‑M2/2‑62 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTg  >  1:2417456‑M2/2‑62 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTg  >  1:924365‑M2/2‑62 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTg  >  1:2348601‑M2/2‑62 (MQ=255)                                                         aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTg  >  1:2160856‑M2/2‑62 (MQ=255)                                                          |                                                             AAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTG  >  W3110S.gb/576854‑576971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.