| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 70061 = | 11 (0.340) | 245 (9.440) +CGCGTACAACT |
9/90 | 0.0 | 93.6% | intergenic (‑13/‑326) | araB/araC | L‑ribulokinase/DNA‑binding transcriptional dual regulator |
| ? | W3110S.gb | 236044 = | 31 (0.960) | intergenic (‑42/‑23) | rnhA/dnaQ | ribonuclease HI, degrades RNA of DNA‑RNA hybrids/DNA polymerase III epsilon subunit | |||||
Only 100 of 295 total aligned reads displayed.
TGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/70112‑70061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGATA > W3110S.gb/236044‑236103 ||||||||||| TGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACA < 1:2745094/60‑1 GACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAAC > 1:2920601/1‑61 GACGCTTTTTATAGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGAGTACAAC > 1:1696996/1‑61 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGTCGCGTACAACTCAAGTC < 1:1248343/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:1548883/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:1489974/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:508489/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:1312244/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:2889588/62‑1 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:99077/62‑1 TTTTATCGCAACTCTCTACTCTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTC < 1:1113024/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2448427/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2847704/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2792317/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2174239/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2118243/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2111116/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:197436/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:1937136/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2550780/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:628044/62‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:783391/62‑1 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2735673/61‑1 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:1175301/61‑1 CTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGAC < 1:2597322/62‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:1811039/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:95029/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:52607/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:1871475/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:567624/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:1447145/59‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCG < 1:768095/59‑1 GTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA < 1:2434951/51‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:1784192/60‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:963270/60‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:1057644/60‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:1210451/60‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:2358100/60‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:913648/60‑1 CTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA < 1:1671826/59‑1 taCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:489298/3‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1498155/1‑62 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1389729/1‑62 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1836319/1‑62 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:311930/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:2219286/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:2262414/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:825761/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:14071/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:1140940/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:686892/1‑53 TCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:7290/1‑53 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCTCT > 1:875754/1‑61 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACT > 1:344072/1‑61 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACT > 1:1421028/1‑61 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACT > 1:1148502/1‑61 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:999035/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1402868/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:2673613/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:175675/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:595065/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:621408/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1712605/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:2085702/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1633285/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1620360/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1530611/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:2908666/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:13782/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:2482169/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:924383/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:1294718/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACAC > 1:2565587/1‑60 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:2022817/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1333691/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1073972/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:1009871/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:455716/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:2699190/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:2522093/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:301733/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:363149/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:388413/1‑49 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTA > 1:1040972/1‑42 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGAC > 1:1608378/1‑37 ACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGAT < 1:735272/61‑1 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:335889/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:709982/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:2121797/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:417601/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:855393/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:2414955/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:190033/61‑2 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:2584921/61‑2 CTCAAGTCTGACATAAATGACCTCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:2048135/62‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:2300847/62‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:2753806/62‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:2772691/62‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:799367/62‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:403642/62‑1 ||||||||||| TGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/70112‑70061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGATA > W3110S.gb/236044‑236103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |