| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2855747 | 10 (0.310) | 99 (3.120) | 6/110 | 0.0 | 91.3% | intergenic (‑285/‑2) | ygbA/mutS | hypothetical protein/methyl‑directed mismatch repair protein |
| ? | W3110S.gb | 4124505 = | 9 (0.280) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
Only 100 of 111 total aligned reads displayed.
TGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAT > W3110S.gb/2855686‑2855799 | gaagaaaggcggaagttgcctctggcgagcataaTTTAATATCAGTAAACCGGACATAAccc < 1:1468047‑M2/28‑1 (MQ=255)gaagaaaggcggaagttgcctctggcgagcataaTTTAATATCAGTAAACCGGACATAAccc < 1:1243153‑M2/28‑1 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:2603079‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:457801‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:1666279‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:793959‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:49451‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:2680981‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:1192490‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:561611‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtg > 1:2370435‑M1/3‑31 (MQ=255) taattTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgct < 1:2436058‑M1/47‑19 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:1237841‑M1/62‑34 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:1587771‑M1/62‑34 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:2591496‑M1/62‑34 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:1102210‑M1/62‑34 (MQ=255) aTTTAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:269126‑M1/62‑34 (MQ=255) tttAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:2503848‑M1/61‑34 (MQ=255) tctaaTATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggca < 1:2661352‑M1/59‑34 (MQ=255) tAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggg < 1:642799‑M1/62‑37 (MQ=255) tAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggg < 1:2595992‑M1/62‑37 (MQ=255) tAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggg < 1:2092644‑M1/62‑37 (MQ=255) tAATATCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggg < 1:2851163‑M1/62‑37 (MQ=255) atatCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcaggg < 1:2464502‑M1/60‑37 (MQ=255) atCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc < 1:141503‑M1/61‑40 (MQ=255) atCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc < 1:654943‑M1/61‑40 (MQ=255) atCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc < 1:1796030‑M1/61‑40 (MQ=255) atCAGTAAACCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggc < 1:87596‑M1/61‑40 (MQ=255) tgggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:1441818/60‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATTGAAAATTTCGACGCCCATACGCCCatgat < 1:338094/61‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:1652365/61‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:720285/61‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:2828957/61‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:751988/61‑1 (MQ=255) aGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:1074396/61‑1 (MQ=255) gggAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:513340/60‑1 (MQ=255) aaacCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:87241‑M1/2‑16 (MQ=255) aaacCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:2098842‑M1/2‑16 (MQ=255) aaacCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:392524‑M1/2‑16 (MQ=255) aaacCGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggg > 1:1367097‑M1/2‑16 (MQ=255) aaCCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCatgat < 1:2406685/57‑1 (MQ=255) ccGGACATAACCCatgaagaaaaatctcgcttttttgaagtgggcagggggcaagtatcccc > 1:6061‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:2915286‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:1891774‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:1766475‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:653965‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:661765‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:1330408‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:2388960‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccc > 1:1175759‑M1/1‑13 (MQ=255) ccGGACATAACCCatgaagaaaaatcgcgcttttttgaagt > 1:1125260‑M1/1‑13 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtggtcagggggcaagtatcccctg < 1:976738‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2361399‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:686326‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:256520‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2507641‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:94839‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2465002‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:1111076‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2311614‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2274402‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:137970‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2181891‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:1956972‑M1/62‑52 (MQ=255) ggACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:1637200‑M1/62‑52 (MQ=255) gACATAACCCatgaagataaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2829730‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaggtgggcagggggcaagtatcccctgc < 1:1674044‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:570371‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1778432‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:602660‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:604816‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:619424‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:635251‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1445430‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:142005‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1386807‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:705773‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1119630‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1090046‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1076644‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1026259‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:531546‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:101236‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2337797‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:229411‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2255067‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2223722‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2757403‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2200590‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2910839‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2138456‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:391045‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1814713‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1790788‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1781875‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1698785‑M1/62‑53 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctg < 1:2425636‑M1/61‑52 (MQ=255) gACATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtataccctg < 1:1060080‑M1/61‑52 (MQ=255) aCATAACCCatgaagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:2318072‑M1/61‑53 (MQ=255) cATAACCCatgtagaaaaatcgcgcttttttgaagtgggcagggggcaagtatcccctgc < 1:1693847‑M1/60‑53 (MQ=255) | TGATTACAACGAAAATAAAAACCATCACACCCCATTTAATATCAGGGAACCGGACATAACCCCATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTAT > W3110S.gb/2855686‑2855799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |