| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2855747 | 10 (0.310) | 99 (3.120) | 6/110 | 0.0 | 91.3% | intergenic (‑285/‑2) | ygbA/mutS | hypothetical protein/methyl‑directed mismatch repair protein |
| ? | W3110S.gb | 4124505 = | 9 (0.280) | coding (1/837 nt) | dam | DNA adenine methylase | |||||
Only 100 of 108 total aligned reads displayed.
GCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC > W3110S.gb/4124446‑4124556 | gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:2492618/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:1095609/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:85770/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:1701574/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:1525662/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:731013/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCa > 1:748484/1‑60 (MQ=255)gcgcTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCAt > 1:1596510/1‑61 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCt < 1:2436058‑M2/18‑1 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:584044‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:2370435‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:2603079‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:2680981‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:457801‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:49451‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:561611‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:793959‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:1192490‑M2/32‑60 (MQ=255) taatttaatatcagtaaaccgcacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTg > 1:661850‑M2/32‑60 (MQ=255) atttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:2591496‑M2/33‑1 (MQ=255) atttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:1102210‑M2/33‑1 (MQ=255) atttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:269126‑M2/33‑1 (MQ=255) atttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:1587771‑M2/33‑1 (MQ=255) tttaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:2503848‑M2/33‑1 (MQ=255) tctaatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCa < 1:2661352‑M2/33‑1 (MQ=255) taatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggg < 1:642799‑M2/36‑1 (MQ=255) taatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggg < 1:2282670‑M2/36‑1 (MQ=255) taatatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggg < 1:2851163‑M2/36‑1 (MQ=255) atatcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAggg < 1:2464502‑M2/36‑1 (MQ=255) atcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:87596‑M2/39‑1 (MQ=255) atcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:141503‑M2/39‑1 (MQ=255) atcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:1796030‑M2/39‑1 (MQ=255) atcagtaaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGc < 1:296031‑M2/39‑1 (MQ=255) aaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:1367097‑M2/17‑53 (MQ=255) aaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:87241‑M2/17‑53 (MQ=255) aaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:1149480‑M2/17‑53 (MQ=255) aaaccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAgggg > 1:2098842‑M2/17‑53 (MQ=255) ccggacataacccATGAAGAAAAATCTCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:6061‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGt > 1:1125260‑M2/14‑41 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:2388960‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:2915286‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:1891774‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:1766475‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:1175759‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:653965‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:1330408‑M2/14‑62 (MQ=255) ccggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATcccc > 1:661765‑M2/14‑62 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGTCAGGGGGCAAGTATCCCCTg < 1:976738‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2652950‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:256520‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2361399‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2507641‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2465002‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:94839‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:686326‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:137970‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:1637200‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:1419121‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:1956972‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2181891‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:1111076‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2274402‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2311614‑M2/51‑1 (MQ=255) ggacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:242727‑M2/51‑1 (MQ=255) gttagtCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc > 1:2191244/1‑62 (MQ=255) gacataacccATGAAGATAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2829730‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAGGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1674044‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTg < 1:2425636‑M2/51‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:604816‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:169124‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:602660‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:619424‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:635251‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1026259‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1445430‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:142005‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:705773‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1386807‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1119630‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1090046‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1076644‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2910839‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:101236‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:229411‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2255067‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2223722‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2200590‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2138456‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2757403‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1814713‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1790788‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:391045‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1781875‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1778432‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:531546‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1698785‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:570371‑M2/52‑1 (MQ=255) gacataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATACCCTg < 1:1060080‑M2/51‑1 (MQ=255) acataacccATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:2318072‑M2/52‑1 (MQ=255) cataacccATGTAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGc < 1:1693847‑M2/52‑1 (MQ=255) | GCGCTGGATGCTGTCGGAGCTTTCTCCACAGCCGGAGAAGGTGTAATTAGTTAGTCAGCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC > W3110S.gb/4124446‑4124556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |