Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3842913	3842950	38	6 [0]	[0] 12	rfaL	O‑antigen ligase

AAAGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATC  >  W3110S.gb/3842851‑3842912                                                              | aaaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:1585996/62‑1 (MQ=255) aaaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:2287274/62‑1 (MQ=255) aaaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:2364615/62‑1 (MQ=255) aaaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:72960/62‑1 (MQ=255)  aaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:1088826/61‑1 (MQ=255)  aaGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATc  <  1:1619770/61‑1 (MQ=255)                                                              | AAAGTACCGCGCAACTATTTAATAAAAATAAAAAAGGATGATTTTTCTTAGTATAAAGAATC  >  W3110S.gb/3842851‑3842912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑