Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3842913	3842950	38	6 [0]	[0] 12	rfaL	O‑antigen ligase

TGCTGCTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATG  >  W3110S.gb/3842951‑3843005 |                                                       tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1034790/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1232207/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1373511/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:144122/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1535606/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1633473/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1934420/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:2609995/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:599715/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:678399/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:911734/55‑1 (MQ=255) tgctgcTCCTGTTGCCGTTCATACACCAAAAGAAATGCGGTCATTTTCATGAATg  <  1:1450687/55‑1 (MQ=255) |                                                       TGCTGCTCCTGTTGCCGTTCCTACACCAAAAGAAATGCGGTCATTTTCATGAATG  >  W3110S.gb/3842951‑3843005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑