Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3844431	3844442	12	29 [0]	[0] 8	[rfaC]–[rfaF]	[rfaC],[rfaF]

CATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCAAA  >  W3110S.gb/3844369‑3844430                                                              | cATCAGTGAGTGCGGGCAACGTATGGAGAACGTCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2484194/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATGGCCCATCGACGATGTTTTAACGATCaaa  >  1:441608/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:967832/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1007278/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:612914/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:493353/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:452934/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:302968/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2903755/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2846525/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2807114/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:277272/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2755933/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2697550/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2629696/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2479626/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2381570/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:2122244/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:211249/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1941639/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1830198/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1820582/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1637646/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1514135/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1498601/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1442099/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1440540/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCaaa  >  1:1382558/1‑62 (MQ=255) cATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCACATCGACGATGTTTTAACGATCaaa  >  1:96560/1‑62 (MQ=255)                                                              | CATCAGTGAGTGCGGGCAACGTATGGAGAACATCGCCCATCGACGATGTTTTAACGATCAAA  >  W3110S.gb/3844369‑3844430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑