Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	248796	248887	92	7 [0]	[1] 28	fhiA	ECK0230:JW5811:b0229; flagellar system protein, promoterless fragment

CCAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAC  >  W3110S.gb/248735‑248795                                                             | ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:1319130/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:1443231/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:1456418/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:1748494/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:2132418/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:2225983/1‑61 (MQ=255) ccAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAc  >  1:2728297/1‑61 (MQ=255)                                                             | CCAGCAGAATATGATCTTTCGTCACCGTGCTACTGGCGACCAGCACGGTGGCGATGGTGAC  >  W3110S.gb/248735‑248795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑