Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	295919	295934	16	15 [0]	[0] 15	intF	predicted phage integrase

TGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGT  >  W3110S.gb/295858‑295918                                                             | tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1365684/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1372497/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1602873/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1636254/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1891748/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:1930997/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:2070405/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:2286935/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:2509043/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:2747991/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:2906730/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:381365/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:392276/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:423413/1‑61 (MQ=255) tGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGt  >  1:606415/1‑61 (MQ=255)                                                             | TGATACCGGTTCTCAATTCTTGAAGATAGTCTTCCCAGGCGACGGAGAAAGTCACTTTTGT  >  W3110S.gb/295858‑295918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑