Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	295919	295934	16	15 [0]	[0] 15	intF	predicted phage integrase

TGCAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGT  >  W3110S.gb/295935‑295993 |                                                           tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1073999/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1120944/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1424150/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1535999/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1736059/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1792979/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:1913411/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:2124346/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:2360292/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:252048/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:2591162/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:2818769/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:2903629/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGt  <  1:847057/59‑1 (MQ=255) tgcAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTAGTGGATCTATCCCTGt  <  1:1175760/59‑1 (MQ=255) |                                                           TGCAGGGATTCTGCTTCTGCGATTTTTACAGCCTTAGCAATTCGTGGATCTATCCCTGT  >  W3110S.gb/295935‑295993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑