Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2003321	2003353	33	14 [0]	[0] 8	fliA	RNA polymerase, sigma 28 (sigma F) factor

CTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAGTTGT  >  W3110S.gb/2003354‑2003414 |                                                             cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCATATTACTGTCCAGTAgttgt  >  1:2342905/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCGAGTAgttgt  >  1:792362/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTGgttgt  >  1:1643398/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAgttgt  >  1:2177122/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAgttgt  >  1:2569736/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAgttgt  >  1:2836577/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAgttgt  >  1:479643/1‑61 (MQ=255) cTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAgttgt  >  1:997925/1‑61 (MQ=255) |                                                             CTCCGGCAACGTTTCGATGGCTTCCATCACCCGCTGGCGCAGATTACTGTCCAGTAGTTGT  >  W3110S.gb/2003354‑2003414

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑