Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2017444	2017606	163	16 [0]	[0] 34	fliG	flagellar motor switching and energizing component

AACGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTACCGCC  >  W3110S.gb/2017607‑2017667 |                                                             aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2927563/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1004789/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2501132/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2504578/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2553092/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2567220/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2695538/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2808105/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2913280/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2466710/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:411755/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:459409/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:597122/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:601581/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:813197/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:827425/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:833823/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1727316/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1089675/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1091780/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1350933/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:165652/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1661476/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1697012/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1702981/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1706196/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2349079/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:176985/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1779760/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1800265/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:1813517/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:194436/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTAccgcc  <  1:2140320/61‑1 (MQ=255) aaCGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTACTAccgcc  <  1:2621221/61‑1 (MQ=255) |                                                             AACGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTACCGCC  >  W3110S.gb/2017607‑2017667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑