Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3308342	3308366	25	40 [0]	[0] 6	nlpI	conserved hypothetical protein

ATCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGC  >  W3110S.gb/3308367‑3308428 |                                                              aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCATGCTCAAGTACAGAATCAAACGc  >  1:93651/1‑62 (MQ=255) aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGc  >  1:1592472/1‑62 (MQ=255) aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGc  >  1:244636/1‑62 (MQ=255) aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGc  >  1:2730026/1‑62 (MQ=255) aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGc  >  1:461318/1‑62 (MQ=255) aTCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGc  >  1:92748/1‑62 (MQ=255) |                                                              ATCCCGCGATTCAAGTGCGCGTAGTTGTAAGTTGGATCAAGCTCAAGTACAGAATCAAACGC  >  W3110S.gb/3308367‑3308428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑