Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3347937	3347941	5	20 [0]	[0] 30	npr	phosphohistidinoprotein‑hexose phosphotransferase component of N‑regulated PTS system (Npr)

GCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAC  >  W3110S.gb/3347942‑3348001 |                                                            gCACCGAGGCTGAAGCCAACAGCGTTATTGCgctg                           >  1:2249762/1‑35 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2768030/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:986789/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:923161/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:898329/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:861811/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:829154/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:746898/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:72532/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:671437/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:657662/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:598275/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:365705/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2865343/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2835281/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:277026/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1174196/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2690976/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2562475/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2298702/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2281066/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2158388/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:2028222/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1922871/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1853904/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1596478/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1593712/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1430370/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:1327711/1‑60 (MQ=255) gCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAc  >  1:122853/1‑60 (MQ=255) |                                                            GCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGAC  >  W3110S.gb/3347942‑3348001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑