Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3532841	3532852	12	29 [0]	[0] 29	cpxA	sensory histidine kinase in two‑component regulatory system with CpxR

CGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTC  >  W3110S.gb/3532853‑3532914 |                                                              cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAg                            >  1:86512/1‑36 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGAt                          >  1:144321/1‑38 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGAtttt            >  1:1056066/1‑52 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGtt   >  1:418968/1‑61 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2550807/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1009347/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:750266/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:682771/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:674512/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:493649/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:428151/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:299107/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:295709/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:285862/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2767686/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1309255/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2463511/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2332227/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2274156/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2133244/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2123488/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1988302/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1882714/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1578784/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1574593/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1495847/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:1308091/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCAAACAGATTTTCCGTCCGTTc  >  1:2513791/1‑62 (MQ=255) cGGTGGACGACGATGGTCCTGGCGTTAGCCAGGAAGATCGCGAACAGATTTTCCGTCCGTTc  >  1:2843503/1‑62 (MQ=255) |                                                              CGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTC  >  W3110S.gb/3532853‑3532914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑